G1983395


Basic Information

Item Value
gene id G1983395
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048589.1
NCBI id CM023243.3
chromosome length 47542702
location 41236632 ~ 41236990 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2267526
ctctctctgtctctctctctgtctctctctgtctctctctctgtctctctctctgtctctctctctgtctctctctgtctctctctctctctctctctctctctgtctctctaactctctctctctgtctctctgtctctctctctctctgtctctctctctctctttctctgtctgtctctctctctctctctctctctctctctc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2267526 True 207 lncRNA 0.49 2 41236632 41236990

Neighbor

gene id symbol gene type direction distance location
si:ch211-132f19.7 LOC106611404 coding upstream 345520 40868101 ~ 40891112 (+)
dnajc27 LOC106611405 coding upstream 376578 40829046 ~ 40860054 (+)
pomca LOC100510783 coding upstream 413806 40819696 ~ 40822826 (+)
snx9a LOC105031565 coding upstream 494893 40689188 ~ 40741739 (+)
LOC118944272 NA coding upstream 656974 40578668 ~ 40579658 (+)
LOC110504259 LOC106603281 coding downstream 60442 41297432 ~ 41350749 (+)
LOC110505965 trim9 coding downstream 310381 41547371 ~ 41622795 (+)
LOC110505964 LOC106611459 coding downstream 399166 41636156 ~ 41666062 (+)
LOC110505960 LOC106611458 coding downstream 440354 41677344 ~ 41737128 (+)
LOC110505959 LOC106611457 coding downstream 503183 41740173 ~ 41757394 (+)
G1983361 NA non-coding upstream 37790 41191975 ~ 41198842 (+)
G1983324 NA non-coding upstream 99906 41114402 ~ 41136726 (+)
G1983320 NA non-coding upstream 126821 41109527 ~ 41109811 (+)
G1983319 NA non-coding upstream 127836 41108489 ~ 41108796 (+)
G1983309 NA non-coding upstream 142203 41094202 ~ 41094429 (+)
G1983404 NA non-coding downstream 21514 41258504 ~ 41258796 (+)
G1983420 NA non-coding downstream 75448 41312438 ~ 41312669 (+)
G1983422 NA non-coding downstream 89459 41326449 ~ 41330431 (+)
G1983459 NA non-coding downstream 115037 41352027 ~ 41352336 (+)
G1983462 NA non-coding downstream 118089 41355079 ~ 41355421 (+)
G1983387 NA other upstream 19880 41215475 ~ 41216752 (+)
G1983277 NA other upstream 188730 41047551 ~ 41047902 (+)
G1982355 NA other upstream 846225 40389658 ~ 40390407 (+)
LOC110505902 LOC106611388 other upstream 1683140 39543907 ~ 39557667 (+)
G1981068 NA other upstream 2141818 39036366 ~ 39094814 (+)
G1983499 NA other downstream 211412 41448402 ~ 41449340 (+)
G1983721 NA other downstream 826035 42063025 ~ 42103896 (+)
G1983777 NA other downstream 995250 42232240 ~ 42232904 (+)

Expression


Co-expression Network