G1983422


Basic Information

Item Value
gene id G1983422
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048589.1
NCBI id CM023243.3
chromosome length 47542702
location 41326449 ~ 41330431 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2267559
gagaagagaagtgttctaaactagagatggagaagagaagtgttctaaactagggatggagaagtgttctaaactagagaTAGAGAAgataagtgttctaaactagggatggagaagagaagtgttctaaactagggatggagaagtgttctaagctagagaaggagaagtgttctaaactagagatggagaagagaagtgttctaaactagggatggagaagagaagtgttctaaactagggatggagaagtgttctaaactaggaatggagaagtgttctaaactagggatggagaagagaagtgttctaagctagggatggagaagagaagtgttctaaactagggatggagaagtgttctaagctagagaaggagaagtgttctaaactagagatggagaagagaagtgttctaaactagggatggataagagaagtgttctaaactagggatggagaagtgttctaaactagggatggagaagtgttctaaactagggatggagaagagaagtgttctaaactagggatggagaagtgttctaaactagggatggataagagaagtgttctaaactagggatggataagataagtgttctaaactagggatggataagataagtgttctaaactagggatggagaagagaagtgttctaaactagggatggagaagtgttctaaactagggatggataagagaagtgttctaaactagggatggagaagtgttctaaactagggatggagaagtgttctaaactagggatggagaagtgttctaaactagggatggataagagaagtgttctaatctagggatggagaagagaagtgttctaaactagggatggataagtgttctaaactagggatggagaagagaagtgttctaaactagggatggagaagataAGTTTTCTAatctagggatggagaagagaagtgttctaaactagggatggagaagataAGTGTTCTAAACttgggatggagaagagaagtgttctaaactagggatggagaagagaagtgttctaaactagggatggagaagagaagtgttctaaactagggatggagaagtttTCTAAGCTAGAGAAGGAGAAGTTTTCTAaactagagatggagaagagaagtgttctaaactagggatggagaagtgttctaaactagggatggagaagtgttctaaactagggatggagaagtgttctaaactagggatggagaggtgttctaaactagggatggagaagtgttctaaactagggatggagaggtgttctaaactagggatggagaagtgttctaaactagagatggagaagtgttctaaactagggatggagaagtgttctaaactagggatggagaagtgttctaaactagggatggataagagaagtgttctaaactagggatggataagagaagtgtgataaactagggatggataagaaaagtgttctaaactagggatggataagaaaagtgttctaaactaggaatggataagagaagtgttctaaactagggatggataagagaagtgttctaaactagggatggataagataagtgttctaaactagggatggataagagaagtgttctaaactagggatggagatgagaagtgttctaaactagggatgga

Function

NR:

description
PREDICTED: S-antigen protein-like, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2267559 True 1665 lncRNA 0.40 3 41326449 41330431

Neighbor

gene id symbol gene type direction distance location
si:ch211-132f19.7 LOC106611404 coding upstream 435337 40868101 ~ 40891112 (+)
dnajc27 LOC106611405 coding upstream 466395 40829046 ~ 40860054 (+)
pomca LOC100510783 coding upstream 503623 40819696 ~ 40822826 (+)
snx9a LOC105031565 coding upstream 584710 40689188 ~ 40741739 (+)
LOC118944272 NA coding upstream 746791 40578668 ~ 40579658 (+)
LOC110505965 trim9 coding downstream 216940 41547371 ~ 41622795 (+)
LOC110505964 LOC106611459 coding downstream 305725 41636156 ~ 41666062 (+)
LOC110505960 LOC106611458 coding downstream 346913 41677344 ~ 41737128 (+)
LOC110505959 LOC106611457 coding downstream 409742 41740173 ~ 41757394 (+)
LOC110504274 LOC106611444 coding downstream 450840 41781271 ~ 41937779 (+)
G1983420 NA non-coding upstream 13780 41312438 ~ 41312669 (+)
G1983404 NA non-coding upstream 67653 41258504 ~ 41258796 (+)
G1983391 NA non-coding upstream 81173 41220680 ~ 41245276 (+)
G1983395 NA non-coding upstream 89459 41236632 ~ 41236990 (+)
G1983361 NA non-coding upstream 127607 41191975 ~ 41198842 (+)
G1983459 NA non-coding downstream 21596 41352027 ~ 41352336 (+)
G1983462 NA non-coding downstream 24648 41355079 ~ 41355421 (+)
G1983463 NA non-coding downstream 25392 41355823 ~ 41356031 (+)
G1983468 NA non-coding downstream 26992 41357423 ~ 41359264 (+)
G1983473 NA non-coding downstream 34253 41364684 ~ 41364930 (+)
G1983387 NA other upstream 109697 41215475 ~ 41216752 (+)
G1983277 NA other upstream 278547 41047551 ~ 41047902 (+)
G1982355 NA other upstream 936042 40389658 ~ 40390407 (+)
LOC110505902 LOC106611388 other upstream 1772957 39543907 ~ 39557667 (+)
G1981068 NA other upstream 2231635 39036366 ~ 39094814 (+)
G1983499 NA other downstream 117971 41448402 ~ 41449340 (+)
G1983721 NA other downstream 732594 42063025 ~ 42103896 (+)
G1983777 NA other downstream 901809 42232240 ~ 42232904 (+)
G1983836 NA other downstream 931796 42262227 ~ 42262714 (+)

Expression


Co-expression Network