Gene
RNA
| Item | Value |
|---|---|
| gene id | G1983565 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048589.1 |
| NCBI id | CM023243.3 |
| chromosome length | 47542702 |
| location | 41591125 ~ 41591533 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| uncharacterized protein LOC103910348 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2267725 | True | 301 | lncRNA | 0.40 | 2 | 41591125 | 41591533 |
41,589,600
41,590,000
41,590,400
41,590,800
41,591,200
41,591,600
41,592,000
41,592,400
41,592,800
41,593,200
41,593,600
41,594,000
NC_048589.1
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110504259 | LOC106603281 | coding | upstream | 240376 | 41297432 ~ 41350749 (+) |
| si:ch211-132f19.7 | LOC106611404 | coding | upstream | 700013 | 40868101 ~ 40891112 (+) |
| dnajc27 | LOC106611405 | coding | upstream | 731071 | 40829046 ~ 40860054 (+) |
| pomca | LOC100510783 | coding | upstream | 768299 | 40819696 ~ 40822826 (+) |
| snx9a | LOC105031565 | coding | upstream | 849386 | 40689188 ~ 40741739 (+) |
| LOC110505964 | LOC106611459 | coding | downstream | 44623 | 41636156 ~ 41666062 (+) |
| LOC110505960 | LOC106611458 | coding | downstream | 85811 | 41677344 ~ 41737128 (+) |
| LOC110505959 | LOC106611457 | coding | downstream | 148640 | 41740173 ~ 41757394 (+) |
| LOC110504274 | LOC106611444 | coding | downstream | 189738 | 41781271 ~ 41937779 (+) |
| LOC110498275 | sos2 | coding | downstream | 353966 | 41945499 ~ 42020153 (+) |
| G1983554 | NA | non-coding | upstream | 32245 | 41557779 ~ 41558880 (+) |
| G1983543 | NA | non-coding | upstream | 64019 | 41526903 ~ 41527106 (+) |
| G1983542 | NA | non-coding | upstream | 64935 | 41525827 ~ 41526190 (+) |
| G1983541 | NA | non-coding | upstream | 65361 | 41525478 ~ 41525764 (+) |
| G1983536 | NA | non-coding | upstream | 71116 | 41513576 ~ 41520009 (+) |
| G1983569 | NA | non-coding | downstream | 9794 | 41601327 ~ 41601744 (+) |
| G1983533 | NA | non-coding | downstream | 34535 | 41626068 ~ 41628090 (+) |
| G1983583 | NA | non-coding | downstream | 63716 | 41655249 ~ 41655737 (+) |
| G1983584 | NA | non-coding | downstream | 69668 | 41661201 ~ 41661706 (+) |
| G1983612 | NA | non-coding | downstream | 139020 | 41730553 ~ 41778877 (+) |
| G1983499 | NA | other | upstream | 141785 | 41448402 ~ 41449340 (+) |
| G1983387 | NA | other | upstream | 374373 | 41215475 ~ 41216752 (+) |
| G1983277 | NA | other | upstream | 543223 | 41047551 ~ 41047902 (+) |
| G1982355 | NA | other | upstream | 1200718 | 40389658 ~ 40390407 (+) |
| G1983721 | NA | other | downstream | 471492 | 42063025 ~ 42103896 (+) |
| G1983777 | NA | other | downstream | 640707 | 42232240 ~ 42232904 (+) |
| G1983836 | NA | other | downstream | 670694 | 42262227 ~ 42262714 (+) |
| cn112 | cn112 | other | downstream | 827627 | 42419107 ~ 42454007 (+) |
