Gene
RNA
| Item | Value |
|---|---|
| gene id | G1983829 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048589.1 |
| NCBI id | CM023243.3 |
| chromosome length | 47542702 |
| location | 42211254 ~ 42213112 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2268072 | True | 340 | lncRNA | 0.46 | 3 | 42211254 | 42213112 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110505971 | LOC106611464 | coding | upstream | 110026 | 42095077 ~ 42101228 (+) |
| LOC110505970 | LOC106611462 | coding | upstream | 119206 | 42080593 ~ 42092048 (+) |
| LOC110505969 | LOC106591813 | coding | upstream | 147471 | 42059695 ~ 42063783 (+) |
| LOC110505968 | LOC106591812 | coding | upstream | 151896 | 42054118 ~ 42059358 (+) |
| LOC110498275 | sos2 | coding | upstream | 191101 | 41945499 ~ 42020153 (+) |
| LOC110505975 | dcaf5 | coding | downstream | 24183 | 42237295 ~ 42270066 (+) |
| LOC110504277 | LOC105025529 | coding | downstream | 71634 | 42284746 ~ 42418042 (+) |
| cn112 | cn112 | coding | downstream | 205995 | 42419107 ~ 42454007 (+) |
| LOC110506000 | NA | coding | downstream | 278861 | 42491973 ~ 42633124 (+) |
| LOC118944289 | NA | coding | downstream | 424650 | 42637762 ~ 42641624 (+) |
| G1983806 | NA | non-coding | upstream | 63144 | 42144870 ~ 42148110 (+) |
| G1983792 | NA | non-coding | upstream | 86963 | 42123781 ~ 42124291 (+) |
| G1983764 | NA | non-coding | upstream | 135090 | 42075819 ~ 42076164 (+) |
| G1983761 | NA | non-coding | upstream | 137455 | 42073335 ~ 42073799 (+) |
| G1983833 | NA | non-coding | downstream | 32211 | 42245323 ~ 42245524 (+) |
| G1983837 | NA | non-coding | downstream | 50239 | 42263351 ~ 42265356 (+) |
| G1983839 | NA | non-coding | downstream | 59408 | 42272520 ~ 42272759 (+) |
| G1984241 | NA | non-coding | downstream | 63892 | 42277004 ~ 42277231 (+) |
| G1983721 | NA | other | upstream | 107358 | 42063025 ~ 42103896 (+) |
| LOC110505959 | LOC106611457 | other | upstream | 469655 | 41740173 ~ 41757394 (+) |
| G1983499 | NA | other | upstream | 761914 | 41448402 ~ 41449340 (+) |
| LOC110504259 | LOC106603281 | other | upstream | 860539 | 41297432 ~ 41350749 (+) |
| G1983387 | NA | other | upstream | 994502 | 41215475 ~ 41216752 (+) |
| G1983777 | NA | other | downstream | 19128 | 42232240 ~ 42232904 (+) |
| G1983836 | NA | other | downstream | 49115 | 42262227 ~ 42262714 (+) |
| LOC110505989 | NA | other | downstream | 509863 | 42722700 ~ 42728639 (+) |
| G1984581 | NA | other | downstream | 754304 | 42964604 ~ 42975274 (+) |
