G1983777


Basic Information

Item Value
gene id G1983777
gene name NA
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048589.1
NCBI id CM023243.3
chromosome length 47542702
location 42232240 ~ 42232904 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2268011
ttacacatatagcggccatgttagctcctccgtttaacgttacacatatagcggccatgttagctcctccgtttaacgttacacatagagcggccatgttagctcccccgtttaacgttacacatatagcagccatgttagctcctctgTTTAACGTTACAcaaatagcagccatgttagctcctccgtttaacgttacacacatagcagccatgttagctcctccgtttaacgttacacatatagcggccatgttagctcctccgtttaacgttacacatatagcggccatgttagctcctccgtttaacgttacacatatagcggccatgttagctcctccgtttaacgttacacatatagcggccatgttagctcctccgtttaacggtacacatatagcagccatgttagctcctccgtttaacggtacacatatagcagccatgttagctcctccgtttaacgttacacatatagcgGCCATGTTAGCTCCCCCGTTTAACGGtacacatatagcagccatgttagctcctccgtttaacgttacacatatagcagccatgttagctcccccgtttaacgttacacatagagcagccatgttagctcctccgtttaacggtacacatatagcagccatgttagctcctccgtttaacgtt

Function

NR:

description
uncharacterized protein LOC110502537

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU2268011 True 665 TUCP 0.46 1 42232240 42232904

Neighbor

gene id symbol gene type direction distance location
LOC110505972 pacs2 coding upstream 5567 42107551 ~ 42226673 (+)
LOC110505971 LOC106611464 coding upstream 131012 42095077 ~ 42101228 (+)
LOC110505970 LOC106611462 coding upstream 140192 42080593 ~ 42092048 (+)
LOC110505969 LOC106591813 coding upstream 168457 42059695 ~ 42063783 (+)
LOC110505968 LOC106591812 coding upstream 172882 42054118 ~ 42059358 (+)
LOC110505975 dcaf5 coding downstream 4391 42237295 ~ 42270066 (+)
LOC110504277 LOC105025529 coding downstream 51842 42284746 ~ 42418042 (+)
cn112 cn112 coding downstream 186203 42419107 ~ 42454007 (+)
LOC110506000 NA coding downstream 259069 42491973 ~ 42633124 (+)
LOC118944289 NA coding downstream 404858 42637762 ~ 42641624 (+)
G1983829 NA non-coding upstream 19128 42211254 ~ 42213112 (+)
G1983830 NA non-coding upstream 19736 42211879 ~ 42212504 (+)
G1983806 NA non-coding upstream 84130 42144870 ~ 42148110 (+)
G1983792 NA non-coding upstream 107949 42123781 ~ 42124291 (+)
G1983733 NA non-coding upstream 111808 41964377 ~ 42120432 (+)
G1983833 NA non-coding downstream 12419 42245323 ~ 42245524 (+)
G1983837 NA non-coding downstream 30447 42263351 ~ 42265356 (+)
G1983839 NA non-coding downstream 39616 42272520 ~ 42272759 (+)
G1984241 NA non-coding downstream 44100 42277004 ~ 42277231 (+)
G1983721 NA other upstream 128344 42063025 ~ 42103896 (+)
LOC110505959 LOC106611457 other upstream 490641 41740173 ~ 41757394 (+)
G1983499 NA other upstream 782900 41448402 ~ 41449340 (+)
LOC110504259 LOC106603281 other upstream 881525 41297432 ~ 41350749 (+)
G1983387 NA other upstream 1015488 41215475 ~ 41216752 (+)
G1983836 NA other downstream 29323 42262227 ~ 42262714 (+)
LOC110505989 NA other downstream 490071 42722700 ~ 42728639 (+)
G1984581 NA other downstream 734512 42964604 ~ 42975274 (+)
G1984431 NA other downstream 809777 43042681 ~ 43043318 (+)

Expression


Co-expression Network