G1983836


Basic Information

Item Value
gene id G1983836
gene name NA
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048589.1
NCBI id CM023243.3
chromosome length 47542702
location 42262227 ~ 42262714 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2268082
GACAGTGAAATGTGTCCTCTGGCCAACGGAGACAGTGGAATGTGTCCTCTGGCCAACAGAGACAGTGGAATGTGTCCTCTGGCCAACAGAGACAGTGGAATGTGTCCTCTGGCCAACAGAGACAGTGGAATGTGTCCTCTGGCCAACAGAGACAGTGGAATGTGTCCTCTGGCCAACAGAGACAGTGGAATGTGTCCTCTGGCCAACAGAGACAGTGGAATGTGTCCTCTGGCCAACAGAGACAGTGGAATGTGTCCTCTGGCCAACAGAGACAGTGGAATGTGTCCTCTGGCCAACAGAGACAGTGGAATGTGTCCTCTGGCCAACAGAGACAGTGGAATGTGTCCTCTGGCCAACAGAGACAGTGGAATGTGTCCTCTGGCACAGCTCACAGAGACAGTGTGGTTAGTTTACCTACATGAGATTACGAGCGATTTTAAATTATTTGtgtttgtcaaatggcagccataTCACCAgtataagaccct

Function

NR:

description
chromosome alignment-maintaining phosphoprotein 1-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2268082 True 488 TUCP 0.50 1 42262227 42262714

Neighbor

gene id symbol gene type direction distance location
LOC110505972 pacs2 coding upstream 35554 42107551 ~ 42226673 (+)
LOC110505971 LOC106611464 coding upstream 160999 42095077 ~ 42101228 (+)
LOC110505970 LOC106611462 coding upstream 170179 42080593 ~ 42092048 (+)
LOC110505969 LOC106591813 coding upstream 198444 42059695 ~ 42063783 (+)
LOC110505968 LOC106591812 coding upstream 202869 42054118 ~ 42059358 (+)
LOC110504277 LOC105025529 coding downstream 22032 42284746 ~ 42418042 (+)
cn112 cn112 coding downstream 156393 42419107 ~ 42454007 (+)
LOC110506000 NA coding downstream 229259 42491973 ~ 42633124 (+)
LOC118944289 NA coding downstream 375048 42637762 ~ 42641624 (+)
LOC110505985 lgmn coding downstream 422318 42685032 ~ 42701955 (+)
G1983833 NA non-coding upstream 16703 42245323 ~ 42245524 (+)
LOC110505975 dcaf5 non-coding upstream 24100 42237295 ~ 42270066 (+)
G1983829 NA non-coding upstream 49115 42211254 ~ 42213112 (+)
G1983830 NA non-coding upstream 49723 42211879 ~ 42212504 (+)
G1983806 NA non-coding upstream 114117 42144870 ~ 42148110 (+)
G1983837 NA non-coding downstream 637 42263351 ~ 42265356 (+)
G1983839 NA non-coding downstream 9806 42272520 ~ 42272759 (+)
G1984241 NA non-coding downstream 14290 42277004 ~ 42277231 (+)
G1984245 NA non-coding downstream 17186 42279900 ~ 42280172 (+)
G1984246 NA non-coding downstream 17627 42280341 ~ 42280572 (+)
G1983777 NA other upstream 29323 42232240 ~ 42232904 (+)
G1983721 NA other upstream 158331 42063025 ~ 42103896 (+)
LOC110505959 LOC106611457 other upstream 520628 41740173 ~ 41757394 (+)
G1983499 NA other upstream 812887 41448402 ~ 41449340 (+)
LOC110504259 LOC106603281 other upstream 911512 41297432 ~ 41350749 (+)
LOC110505989 NA other downstream 460261 42722700 ~ 42728639 (+)
G1984581 NA other downstream 704702 42964604 ~ 42975274 (+)
G1984431 NA other downstream 779967 43042681 ~ 43043318 (+)
G1984764 NA other downstream 1208842 43471556 ~ 43472009 (+)

Expression


Co-expression Network