G1984529


Basic Information

Item Value
gene id G1984529
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048589.1
NCBI id CM023243.3
chromosome length 47542702
location 42778575 ~ 42778929 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2268933
ggctgttatagcagcaatgttccaacatctagtggaacgccttcccagaagagtggaggctgttatagcagcaatgttccatcatctagtggaaagccttcccagaagagtggaggctgttatagcagcaatgttccatcatctagtggaaagccttcccagaagagtggaggctgttatagcagcaatgttccatcatctagtggaaagccttcccagaagaatggaggctgttatagcagcaatgttccatcatctagtggaaagccttcccagaagagtggaggctgttatagcagcaa

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2268933 True 302 lncRNA 0.47 2 42778575 42778929

Neighbor

gene id symbol gene type direction distance location
LOC110504284 LOC106611474 coding upstream 11225 42750509 ~ 42767350 (+)
LOC110505990 LOC106611473 coding upstream 31510 42739235 ~ 42747065 (+)
LOC110505989 NA coding upstream 50120 42722700 ~ 42728639 (+)
LOC110505988 chp1 coding upstream 62842 42707664 ~ 42715733 (+)
LOC110505985 lgmn coding upstream 76620 42685032 ~ 42701955 (+)
trip11 trip11 coding downstream 18552 42797481 ~ 42855269 (+)
LOC110504345 LOC106611472 coding downstream 90052 42868981 ~ 42888144 (+)
zfyve26 LOC106611478 coding downstream 140008 42918937 ~ 43039187 (+)
vti1b vti1b coding downstream 281079 43060008 ~ 43073929 (+)
LOC110506001 rbm25 coding downstream 331683 43110612 ~ 43152565 (+)
G1984526 NA non-coding upstream 19400 42758810 ~ 42759175 (+)
G1984525 NA non-coding upstream 22903 42755327 ~ 42755672 (+)
G1984408 NA non-coding upstream 47475 42729724 ~ 42731100 (+)
G1984424 NA non-coding upstream 48743 42729486 ~ 42729832 (+)
G1984416 NA non-coding upstream 49186 42728866 ~ 42729389 (+)
G1984539 NA non-coding downstream 31663 42810592 ~ 42811138 (+)
G1984543 NA non-coding downstream 43068 42821997 ~ 42822476 (+)
G1984550 NA non-coding downstream 74210 42853139 ~ 42853520 (+)
G1984434 NA non-coding downstream 80799 42859728 ~ 42860181 (+)
cn112 cn112 other upstream 324752 42419107 ~ 42454007 (+)
G1983836 NA other upstream 515861 42262227 ~ 42262714 (+)
G1983777 NA other upstream 545671 42232240 ~ 42232904 (+)
G1983721 NA other upstream 674679 42063025 ~ 42103896 (+)
G1984581 NA other downstream 188487 42964604 ~ 42975274 (+)
G1984431 NA other downstream 263752 43042681 ~ 43043318 (+)
G1984764 NA other downstream 692627 43471556 ~ 43472009 (+)
G1984797 NA other downstream 795114 43574043 ~ 43574613 (+)
G1984803 NA other downstream 834619 43613548 ~ 43635501 (+)

Expression


Co-expression Network