G1984543


Basic Information

Item Value
gene id G1984543
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048589.1
NCBI id CM023243.3
chromosome length 47542702
location 42821997 ~ 42822476 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2268949
CCTAGACAACCAAGTGAGTGGAGTTCCTAACTCATTTGTGACCTTATTTCATCAATCAAGAACAAGGGCGGGGCAATAATCCGCTGACGCTCGGCCGTCCGTGGAAGGAGTTTGACCCATGTGTGCCGGAGACTGCTGCATTAGGATGCTGTTAGACCAGCCAGGACACTTAGTATCTTCATTTATCATTAGGATGCTGTTAGACCAGCCAGGACACTTAGTATCTTCATTTATCATTAGGATGCTGTTAGACCAGCCAGGACACTTAGTATCTTCATTTATCATTAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2268949 True 288 lncRNA 0.45 2 42821997 42822476

Neighbor

gene id symbol gene type direction distance location
golga5 golga5 coding upstream 32026 42768443 ~ 42789971 (+)
LOC110504284 LOC106611474 coding upstream 54647 42750509 ~ 42767350 (+)
LOC110505990 LOC106611473 coding upstream 74932 42739235 ~ 42747065 (+)
LOC110505989 NA coding upstream 93542 42722700 ~ 42728639 (+)
LOC110505988 chp1 coding upstream 106264 42707664 ~ 42715733 (+)
LOC110504345 LOC106611472 coding downstream 46505 42868981 ~ 42888144 (+)
zfyve26 LOC106611478 coding downstream 96461 42918937 ~ 43039187 (+)
vti1b vti1b coding downstream 237532 43060008 ~ 43073929 (+)
LOC110506001 rbm25 coding downstream 288136 43110612 ~ 43152565 (+)
LOC110505947 LOC106591369 coding downstream 553618 43376094 ~ 43395316 (+)
G1984539 NA non-coding upstream 10859 42810592 ~ 42811138 (+)
G1984529 NA non-coding upstream 43068 42778575 ~ 42778929 (+)
G1984526 NA non-coding upstream 62822 42758810 ~ 42759175 (+)
G1984525 NA non-coding upstream 66325 42755327 ~ 42755672 (+)
G1984408 NA non-coding upstream 90897 42729724 ~ 42731100 (+)
G1984550 NA non-coding downstream 30663 42853139 ~ 42853520 (+)
G1984434 NA non-coding downstream 37252 42859728 ~ 42860181 (+)
G1984556 NA non-coding downstream 59314 42881790 ~ 42882135 (+)
G1984559 NA non-coding downstream 61253 42883729 ~ 42883952 (+)
cn112 cn112 other upstream 368174 42419107 ~ 42454007 (+)
G1983836 NA other upstream 559283 42262227 ~ 42262714 (+)
G1983777 NA other upstream 589093 42232240 ~ 42232904 (+)
G1983721 NA other upstream 718101 42063025 ~ 42103896 (+)
G1984581 NA other downstream 144940 42964604 ~ 42975274 (+)
G1984431 NA other downstream 220205 43042681 ~ 43043318 (+)
G1984764 NA other downstream 649080 43471556 ~ 43472009 (+)
G1984797 NA other downstream 751567 43574043 ~ 43574613 (+)
G1984803 NA other downstream 791072 43613548 ~ 43635501 (+)

Expression


Co-expression Network