G1984569


Basic Information

Item Value
gene id G1984569
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048589.1
NCBI id CM023243.3
chromosome length 47542702
location 42908897 ~ 42910078 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2268977
gagaattaacgtagctggttaggagaattaacgtagcaggttaggagaattaacgtagcaggttaggagaattaacgtagcaggttaggtgaattaacgtagcaggttaggagaattaacgtagcaggttaggtgaattaacgtagcaggttaggagaattaacgtagcaggttaggagaattaacatagtaggttaggtgaattaacgtagcaggttaggagaattaacgcagcaggataggagaattaacgtagcaggttaggagaattaacgtagcaggttaggagaattaacatagtaggttaggtgaattaacgtagcaggttaggagaatt

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2268977 True 337 lncRNA 0.40 3 42908897 42910078

Neighbor

gene id symbol gene type direction distance location
LOC110504345 LOC106611472 coding upstream 20753 42868981 ~ 42888144 (+)
trip11 trip11 coding upstream 53628 42797481 ~ 42855269 (+)
golga5 golga5 coding upstream 118926 42768443 ~ 42789971 (+)
LOC110504284 LOC106611474 coding upstream 141547 42750509 ~ 42767350 (+)
LOC110505990 LOC106611473 coding upstream 161832 42739235 ~ 42747065 (+)
zfyve26 LOC106611478 coding downstream 8859 42918937 ~ 43039187 (+)
vti1b vti1b coding downstream 149930 43060008 ~ 43073929 (+)
LOC110506001 rbm25 coding downstream 200534 43110612 ~ 43152565 (+)
LOC110505947 LOC106591369 coding downstream 466016 43376094 ~ 43395316 (+)
plekhd1 plekhd1 coding downstream 500877 43410955 ~ 43436311 (+)
G1984559 NA non-coding upstream 24945 42883729 ~ 42883952 (+)
G1984556 NA non-coding upstream 26762 42881790 ~ 42882135 (+)
G1984434 NA non-coding upstream 48716 42859728 ~ 42860181 (+)
G1984550 NA non-coding upstream 55377 42853139 ~ 42853520 (+)
G1984575 NA non-coding downstream 27388 42937466 ~ 42938169 (+)
G1984577 NA non-coding downstream 36201 42946279 ~ 42946536 (+)
G1984578 NA non-coding downstream 43547 42953625 ~ 42959555 (+)
G1984580 NA non-coding downstream 50706 42960784 ~ 42961101 (+)
G1984581 NA non-coding downstream 54526 42964604 ~ 42975274 (+)
LOC110505989 NA other upstream 180948 42722700 ~ 42728639 (+)
cn112 cn112 other upstream 455074 42419107 ~ 42454007 (+)
G1983836 NA other upstream 646183 42262227 ~ 42262714 (+)
G1983777 NA other upstream 675993 42232240 ~ 42232904 (+)
G1983721 NA other upstream 805001 42063025 ~ 42103896 (+)
G1984431 NA other downstream 132603 43042681 ~ 43043318 (+)
G1984764 NA other downstream 561478 43471556 ~ 43472009 (+)
G1984797 NA other downstream 663965 43574043 ~ 43574613 (+)
G1984803 NA other downstream 703470 43613548 ~ 43635501 (+)

Expression


Co-expression Network