Gene
RNA
| Item | Value |
|---|---|
| gene id | G1985675 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048589.1 |
| NCBI id | CM023243.3 |
| chromosome length | 47542702 |
| location | 43152071 ~ 43153626 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| Transposable element Tcb1 transposase |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2270494 | True | 1532 | lncRNA | 0.41 | 2 | 43152071 | 43153626 |
43,148,800
43,149,200
43,149,600
43,150,000
43,150,400
43,150,800
43,151,200
43,151,600
43,152,000
43,152,400
43,152,800
43,153,200
43,153,600
43,154,000
43,154,400
43,154,800
43,155,200
43,155,600
NC_048589.1
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| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| arg2 | LOC106611485 | coding | downstream | 42125 | 43082185 ~ 43109946 (-) |
| LOC110506003 | LOC106611488 | coding | downstream | 92522 | 43042104 ~ 43059549 (-) |
| LOC118944233 | NA | coding | downstream | 403117 | 42747711 ~ 42748954 (-) |
| oip5 | oip5 | coding | downstream | 412915 | 42732055 ~ 42739156 (-) |
| LOC110505983 | LOC106611415 | coding | downstream | 485312 | 42660899 ~ 42666759 (-) |
| LOC110519337 | NA | coding | upstream | 17793 | 43171419 ~ 43221553 (-) |
| LOC110504340 | NA | coding | upstream | 72026 | 43225652 ~ 43235886 (-) |
| LOC118944275 | LOC106591229 | coding | upstream | 162926 | 43316552 ~ 43317479 (-) |
| LOC110504270 | LOC106591229 | coding | upstream | 198995 | 43352621 ~ 43353563 (-) |
| LOC118944279 | NA | coding | upstream | 404858 | 43558484 ~ 43559128 (-) |
| G1985685 | NA | non-coding | downstream | 11817 | 43138370 ~ 43140254 (-) |
| G1985676 | LOC106611484 | non-coding | downstream | 15496 | 43136138 ~ 43136575 (-) |
| G1985684 | NA | non-coding | downstream | 16784 | 43134632 ~ 43135287 (-) |
| G1985670 | NA | non-coding | downstream | 40823 | 43110625 ~ 43111248 (-) |
| G1985687 | NA | non-coding | upstream | 4041 | 43157667 ~ 43157989 (-) |
| G1985717 | NA | non-coding | upstream | 87286 | 43240912 ~ 43241115 (-) |
| G1985718 | NA | non-coding | upstream | 88099 | 43241725 ~ 43241957 (-) |
| G1985723 | NA | non-coding | upstream | 149651 | 43303277 ~ 43305143 (-) |
| G1984232 | NA | other | downstream | 881712 | 42267939 ~ 42270359 (-) |
| G1983984 | NA | other | downstream | 1413005 | 41737575 ~ 41739066 (-) |
| G1983374 | NA | other | downstream | 1954984 | 41189968 ~ 41197087 (-) |
| LOC110504262 | ect2l | other | downstream | 2207718 | 40917719 ~ 40944573 (-) |
| G1983003 | NA | other | downstream | 2593082 | 40557298 ~ 40558989 (-) |
| G1985719 | NA | other | upstream | 120561 | 43274187 ~ 43274655 (-) |
| G1985771 | NA | other | upstream | 237770 | 43391396 ~ 43395781 (-) |
| G1985986 | NA | other | upstream | 919916 | 44073542 ~ 44076910 (-) |
| G1985988 | NA | other | upstream | 1051391 | 44205017 ~ 44205705 (-) |
| G1986600 | NA | other | upstream | 2284394 | 45438020 ~ 45438668 (-) |
