G1984430


Basic Information

Item Value
gene id G1984430
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048589.1
NCBI id CM023243.3
chromosome length 47542702
location 43171407 ~ 43173165 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2268827
tGTGCAGTGGCCAATTGATGAATGAAAAGAGACATTGTTCCAAAACACTAGAAAGTTTAATGACACTAGgagattgtcaagccaagcctTCAATACTGGGTAAGTCTACAAGACAGggagggatgtattttctgtttgttcAAAACACAAACCATGATATCGAAGTGCTCGAAGTTGGTTTGTTTTGTTAATTGGTTGTCAAACCTGTCGGTGGAAGATTCgttgaatatattttatataaatatggcatcaaaatgttgaaaCTCTGATTTCCCCCTAGCTGATCATGGTCTGCCTCCGTCTCTGATCGTAATgtgatgaaacaggcagggagagggagctcGTCTGTGGTGGTCGGtaaaccctcaaccttctggcccaaAGCCCTGCGTGGCATCAACTGTGCCAGAAAAGCAGACTGAAGTGGCAAAGTCAATATCCACGTTTATAAAAACAGGGTCGCTACAGTTCTTGTTATTTGTGGTCGTAAACATTATATTGAGTTAATTCTATGAGGGCGGAGGGTCGTGGAAATATTTGTAACTGTGGAGAGGTACATTTTGATCTGTCCCCTAATTATATACCGTTTATTATTCACAAACTAACATTTAGAAAATGGAAAGCAAAGTGTATTGATACATAATCTACTGTAATTACtggaaaaacaaacagacattgATTTTGTAAGTTAATGGAAAGATTGTTTTGGCTGAATTTATTTAAATATACATTTAAATTGCCAGTTCATGTTCATAGGAGATTCTTAAAAGCACATCTTCACATAGACAGGGCAATAAAGAGATACTGGCAACAATAAGCACAATGGACAATACAATTATATGCAGGGGCAGACTGGGACCAGAAACCGGCCCAGGCATTTCTAACACACCTGCCCATGTTTTTCTTTAAGACCCTCTTTACTagacaaattattattattttgctaaaaaaaaaaagccaatttagacaggcccactgggcTAAAGATGAATCGgtccatctggcatttgccagaattgcccATTTGCCAGTCCATTCTTGATCACATGGAAGAATCAACACCCATGCAGGACATCCTCCTTGGGCCGCTTGTATTCCGTTAAATCTGTTTCTCTGAGGAGCCCTGCAtgtgaaacacagacacagagattaAAGACAGTATGTTGTCTGCATGTGAAACACACAGATACAGGATAAAGACAGTATGGTGTCTGTatggaaacacagacacagagatacaggataaagacagtatggtgtctgtatggaaacacagagatacaggatgaagacagtatggtgtctgtatggtgtctgtttagtgtctgtatggaaacacagacacagagatacaggataaagacagtatggtgtctGTATGGTGTCTGTATgggaaacacagagatacaggaTAAAGACAGTATGGTGTCAGTATGGTGTCCACAGAAATAGAATCAAGGTTTTATTTATATGATGGTGTCAGGTTCAAACCTTTATTAGCCCATAGctaacctgatcccagatctgtttgtgctgtcctgtcaactcctatggtcattacctaacctgatcccagatctgtttgt

Function

NR:

description
PREDICTED: transmembrane protein 229B-like isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2268827 True 1586 lncRNA 0.40 2 43171407 43173165

Neighbor

gene id symbol gene type direction distance location
LOC110506001 rbm25 coding upstream 18842 43110612 ~ 43152565 (+)
vti1b vti1b coding upstream 97478 43060008 ~ 43073929 (+)
zfyve26 LOC106611478 coding upstream 132220 42918937 ~ 43039187 (+)
LOC110504345 LOC106611472 coding upstream 283263 42868981 ~ 42888144 (+)
trip11 trip11 coding upstream 316138 42797481 ~ 42855269 (+)
LOC110505947 LOC106591369 coding downstream 202929 43376094 ~ 43395316 (+)
plekhd1 plekhd1 coding downstream 237790 43410955 ~ 43436311 (+)
LOC118944278 LOC106591229 coding downstream 296530 43469695 ~ 43470614 (+)
LOC118944350 NA coding downstream 542949 43716114 ~ 43716793 (+)
LOC118944157 LOC106591229 coding downstream 573480 43746645 ~ 43747748 (+)
G1984624 NA non-coding upstream 1322 43169774 ~ 43170085 (+)
G1984622 NA non-coding upstream 5617 43165496 ~ 43165790 (+)
G1984615 NA non-coding upstream 15482 43155710 ~ 43155925 (+)
G1984618 NA non-coding upstream 16253 43154810 ~ 43155154 (+)
G1984436 NA non-coding upstream 78548 43082211 ~ 43092859 (+)
G1984627 NA non-coding downstream 13039 43186204 ~ 43188444 (+)
G1984649 NA non-coding downstream 72653 43245818 ~ 43246026 (+)
G1984651 NA non-coding downstream 74182 43247347 ~ 43274418 (+)
G1984654 NA non-coding downstream 86645 43259810 ~ 43294386 (+)
G1984650 NA non-coding downstream 124478 43297643 ~ 43305878 (+)
G1984431 NA other upstream 128089 43042681 ~ 43043318 (+)
G1984581 NA other upstream 196133 42964604 ~ 42975274 (+)
LOC110505989 NA other upstream 443458 42722700 ~ 42728639 (+)
cn112 cn112 other upstream 717584 42419107 ~ 42454007 (+)
G1983836 NA other upstream 908693 42262227 ~ 42262714 (+)
G1984764 NA other downstream 298391 43471556 ~ 43472009 (+)
G1984797 NA other downstream 400878 43574043 ~ 43574613 (+)
G1984803 NA other downstream 440383 43613548 ~ 43635501 (+)
G1984807 NA other downstream 454827 43627992 ~ 43628808 (+)
G1984810 LOC106591229 other downstream 460667 43633832 ~ 43634426 (+)

Expression


Co-expression Network