G1984627


Basic Information

Item Value
gene id G1984627
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048589.1
NCBI id CM023243.3
chromosome length 47542702
location 43186204 ~ 43188444 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2269058
gaagaccagggatgttctctgtttagtgagtcctccagatcagaggcagtaaggataaccagggatgttctctgtttagtgagtccaccagatcagaggcagtagagatgaccagggatgttctctgtttagtgagtccaccagatcagaggcagtagggatgaccagggatgttctctgtttagtgagtcctccagatcagaggcagtagggatgatcagggatgttctctgtttagtgagtcctccagatcaggggcagtagggatggccagggatgttctctgtttagtgagtccaccagatcagaggcagtagggaggaccagggatgttctctgtttagtgagtcctccagatcaaaggcagtagggaggaccagggatgttctctgtttagtgagtcctccagatcagaggcagtagggaggaccagggatgttctctgtttagtgagtcctccagatcagaggcagtagggataaccagggatgttctctgtttagtgagtccaccagatcagaggcagtagagatgaccagggatgttctctgtttagtgagtccaccagatcagaggcagtagggatgaccagggaagttctctgtttagtgagtcctccagatcagaggcagtagggaggaccagggatgttctctgtttagtgagtcctccagatcagaggcagtagggatgtccagggatgttctctgtttagtgagtcctccagatcagaggcagtagggaggaccagggatgttctctgtttagtgagtcctccagatcagaggcagtagtgatgaccagggaagttctctgtttagtgagtcctccagatcagaggcagtagggaggaccagggatgttctctgtttagtgagtcctccagatcagaggcagttgggatgtccagggatgttctctgtttagtgagtcctccagatcagaggcagtagggaggaccagggatgttctctgtttagtgagtcctccagatcagaggcagtagggatgaccagggatgttctctgtttagtgagtcctccagatcagaggcagtagggatgaccagggatgttccctgtttagtgagtccaccagatcagaggcagtagggaggaccagggatgt

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2269058 True 1128 lncRNA 0.51 2 43186204 43188444

Neighbor

gene id symbol gene type direction distance location
LOC110506001 rbm25 coding upstream 33639 43110612 ~ 43152565 (+)
vti1b vti1b coding upstream 112275 43060008 ~ 43073929 (+)
zfyve26 LOC106611478 coding upstream 147017 42918937 ~ 43039187 (+)
LOC110504345 LOC106611472 coding upstream 298060 42868981 ~ 42888144 (+)
trip11 trip11 coding upstream 330935 42797481 ~ 42855269 (+)
LOC110505947 LOC106591369 coding downstream 187650 43376094 ~ 43395316 (+)
plekhd1 plekhd1 coding downstream 222511 43410955 ~ 43436311 (+)
LOC118944278 LOC106591229 coding downstream 281251 43469695 ~ 43470614 (+)
LOC118944350 NA coding downstream 527670 43716114 ~ 43716793 (+)
LOC118944157 LOC106591229 coding downstream 558201 43746645 ~ 43747748 (+)
G1984430 NA non-coding upstream 13039 43171407 ~ 43173165 (+)
G1984624 NA non-coding upstream 16119 43169774 ~ 43170085 (+)
G1984622 NA non-coding upstream 20414 43165496 ~ 43165790 (+)
G1984615 NA non-coding upstream 30279 43155710 ~ 43155925 (+)
G1984618 NA non-coding upstream 31050 43154810 ~ 43155154 (+)
G1984649 NA non-coding downstream 57374 43245818 ~ 43246026 (+)
G1984651 NA non-coding downstream 58903 43247347 ~ 43274418 (+)
G1984654 NA non-coding downstream 71366 43259810 ~ 43294386 (+)
G1984650 NA non-coding downstream 109199 43297643 ~ 43305878 (+)
G1984666 NA non-coding downstream 124188 43312632 ~ 43313011 (+)
G1984431 NA other upstream 142886 43042681 ~ 43043318 (+)
G1984581 NA other upstream 210930 42964604 ~ 42975274 (+)
LOC110505989 NA other upstream 458255 42722700 ~ 42728639 (+)
cn112 cn112 other upstream 732381 42419107 ~ 42454007 (+)
G1983836 NA other upstream 923490 42262227 ~ 42262714 (+)
G1984764 NA other downstream 283112 43471556 ~ 43472009 (+)
G1984797 NA other downstream 385599 43574043 ~ 43574613 (+)
G1984803 NA other downstream 425104 43613548 ~ 43635501 (+)
G1984807 NA other downstream 439548 43627992 ~ 43628808 (+)
G1984810 LOC106591229 other downstream 445388 43633832 ~ 43634426 (+)

Expression


Co-expression Network