G1984650


Basic Information

Item Value
gene id G1984650
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048589.1
NCBI id CM023243.3
chromosome length 47542702
location 43297643 ~ 43305878 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2269083
tttagtagtgaggatgtttagtattgaggatgtttagtattgaggatgtttagtaatgaggatgtttagtagtgaggatgtttagtattgaggatgttttagtattgaggatgtttaatgttgaggatgtttagtattgaggatgtttagtaatgaggatgtttagtaatgaggatgtttagtattgaggatgtttaatattgaggatgtttagtagtgaggatgtttagtaatgaggatgtttagtattgaggatgtttagtattgaggatgtttagtattgaggatgttttagtagtgaggatgtttagtattgaggatgtttagtattgaggatgtttagtagtgaggatgttttagtagtgaggatgtttagtattgaggatgtttagtattgaggatgtttagtagtgaggatgtttagtattgaggatgtttagtattgaggatgtttagtgttgaggatgtttagtattgaggatgtttagtattgaggatgtttagtattgaggaggtttagtagtgaggatgtttagta

Function

NR:

description
melanoma-associated antigen C1-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2269083 True 538 lncRNA 0.33 2 43297643 43305878

Neighbor

gene id symbol gene type direction distance location
LOC110506001 rbm25 coding upstream 145078 43110612 ~ 43152565 (+)
vti1b vti1b coding upstream 223714 43060008 ~ 43073929 (+)
zfyve26 LOC106611478 coding upstream 258456 42918937 ~ 43039187 (+)
LOC110504345 LOC106611472 coding upstream 409499 42868981 ~ 42888144 (+)
trip11 trip11 coding upstream 442374 42797481 ~ 42855269 (+)
LOC110505947 LOC106591369 coding downstream 70216 43376094 ~ 43395316 (+)
plekhd1 plekhd1 coding downstream 105077 43410955 ~ 43436311 (+)
LOC118944278 LOC106591229 coding downstream 163817 43469695 ~ 43470614 (+)
LOC118944350 NA coding downstream 410236 43716114 ~ 43716793 (+)
LOC118944157 LOC106591229 coding downstream 440767 43746645 ~ 43747748 (+)
G1984654 NA non-coding upstream 3257 43259810 ~ 43294386 (+)
G1984651 NA non-coding upstream 23225 43247347 ~ 43274418 (+)
G1984649 NA non-coding upstream 51617 43245818 ~ 43246026 (+)
G1984627 NA non-coding upstream 109199 43186204 ~ 43188444 (+)
G1984430 NA non-coding upstream 124478 43171407 ~ 43173165 (+)
G1984666 NA non-coding downstream 6754 43312632 ~ 43313011 (+)
G1984682 NA non-coding downstream 28395 43334273 ~ 43344869 (+)
G1984719 NA non-coding downstream 80758 43386636 ~ 43388530 (+)
G1984724 NA non-coding downstream 96207 43402085 ~ 43408977 (+)
G1984733 NA non-coding downstream 116109 43421987 ~ 43429153 (+)
G1984431 NA other upstream 254325 43042681 ~ 43043318 (+)
G1984581 NA other upstream 322369 42964604 ~ 42975274 (+)
LOC110505989 NA other upstream 569694 42722700 ~ 42728639 (+)
cn112 cn112 other upstream 843820 42419107 ~ 42454007 (+)
G1983836 NA other upstream 1034929 42262227 ~ 42262714 (+)
G1984764 NA other downstream 165678 43471556 ~ 43472009 (+)
G1984797 NA other downstream 268165 43574043 ~ 43574613 (+)
G1984803 NA other downstream 307670 43613548 ~ 43635501 (+)
G1984807 NA other downstream 322114 43627992 ~ 43628808 (+)
G1984810 LOC106591229 other downstream 327954 43633832 ~ 43634426 (+)

Expression


Co-expression Network