Gene
RNA
| Item | Value |
|---|---|
| gene id | G1984682 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048589.1 |
| NCBI id | CM023243.3 |
| chromosome length | 47542702 |
| location | 43334273 ~ 43344869 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2269149 | True | 229 | lncRNA | 0.39 | 2 | 43334273 | 43344869 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110506001 | rbm25 | coding | upstream | 181708 | 43110612 ~ 43152565 (+) |
| vti1b | vti1b | coding | upstream | 260344 | 43060008 ~ 43073929 (+) |
| zfyve26 | LOC106611478 | coding | upstream | 295086 | 42918937 ~ 43039187 (+) |
| LOC110504345 | LOC106611472 | coding | upstream | 446129 | 42868981 ~ 42888144 (+) |
| trip11 | trip11 | coding | upstream | 479004 | 42797481 ~ 42855269 (+) |
| LOC110505947 | LOC106591369 | coding | downstream | 31225 | 43376094 ~ 43395316 (+) |
| plekhd1 | plekhd1 | coding | downstream | 66086 | 43410955 ~ 43436311 (+) |
| LOC118944278 | LOC106591229 | coding | downstream | 124826 | 43469695 ~ 43470614 (+) |
| LOC118944350 | NA | coding | downstream | 371245 | 43716114 ~ 43716793 (+) |
| LOC118944157 | LOC106591229 | coding | downstream | 401776 | 43746645 ~ 43747748 (+) |
| G1984666 | NA | non-coding | upstream | 21262 | 43312632 ~ 43313011 (+) |
| G1984650 | NA | non-coding | upstream | 28395 | 43297643 ~ 43305878 (+) |
| G1984654 | NA | non-coding | upstream | 39887 | 43259810 ~ 43294386 (+) |
| G1984651 | NA | non-coding | upstream | 59855 | 43247347 ~ 43274418 (+) |
| G1984649 | NA | non-coding | upstream | 88247 | 43245818 ~ 43246026 (+) |
| G1984719 | NA | non-coding | downstream | 41767 | 43386636 ~ 43388530 (+) |
| G1984724 | NA | non-coding | downstream | 57216 | 43402085 ~ 43408977 (+) |
| G1984733 | NA | non-coding | downstream | 77118 | 43421987 ~ 43429153 (+) |
| G1984710 | NA | non-coding | downstream | 93308 | 43438177 ~ 43438844 (+) |
| G1984741 | NA | non-coding | downstream | 97227 | 43442096 ~ 43442927 (+) |
| G1984431 | NA | other | upstream | 290955 | 43042681 ~ 43043318 (+) |
| G1984581 | NA | other | upstream | 358999 | 42964604 ~ 42975274 (+) |
| LOC110505989 | NA | other | upstream | 606324 | 42722700 ~ 42728639 (+) |
| cn112 | cn112 | other | upstream | 880450 | 42419107 ~ 42454007 (+) |
| G1983836 | NA | other | upstream | 1071559 | 42262227 ~ 42262714 (+) |
| G1984764 | NA | other | downstream | 126687 | 43471556 ~ 43472009 (+) |
| G1984797 | NA | other | downstream | 229174 | 43574043 ~ 43574613 (+) |
| G1984803 | NA | other | downstream | 268679 | 43613548 ~ 43635501 (+) |
| G1984807 | NA | other | downstream | 283123 | 43627992 ~ 43628808 (+) |
| G1984810 | LOC106591229 | other | downstream | 288963 | 43633832 ~ 43634426 (+) |
