G1984719



Basic Information


Item Value
gene id G1984719
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048589.1
NCBI id CM023243.3
chromosome length 47542702
location 43386636 ~ 43388530 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU2269197
ctgatagggaacagactagttgTGTCAGAACGtggtctgatagggaacagactagtagtgtcagaaggtgggtcaGGAGGAGTAGTTTTcccttgaaggctttgacaaggctgtacatctgatgtgTAAAAAGGCCCTTccttcccttgtagtttggagttcagttcattcatgagggccatgatgtccactgGGAAGGcaaaatcaaccaaccaaccattcTTCATCTGGCAGTTGAGGGAAATCCACCTATTCTTTTCATTTGAAAAAAACTCAGCCATCTCCGACTTCAGGTGCCACACCCTtttaagcaccttccccaaacttAGCCATCTCTCACgtttgtgtggtaggggagatctgcattACCTGACTCTGTCTCTTCCGACAGTGAGACAAAAACTGCCTGTGGTTTAAAGATTTTGCTCATTTTCATTTGGCTTTCAAGAGGCCCAATCTGCCTGTGCAACAAGGCCCATCTGCTAGAGCAACAAGGTCATTAACCAAAAAAGCCCATTTTAAGTTGATTTGAAAACCTGGAAAACACTAGCTATTCTGTTAAGGTTGTATGGAAGTGTATATAAATGTACACAAACTTTAATTAGACTTTTaatcaggaaagtattcagacacctatTTCCTCATGTTACGTTAGTTTTATTCAAaatattgattaaataaaacattttcctcatccatctacacacaataccccataatgacatcacaataccccataatgacatcacaataccccataatgacatcacaattccccataatgaca

Function


NR:

description
General transcription factor II-I repeat domain-containing protein 2B, partial

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU2269197 True 787 lncRNA 0.41 2 43386636 43388530

Neighbor


gene id symbol gene type direction distance location
LOC110506001 rbm25 coding upstream 234071 43110612 ~ 43152565 (+)
vti1b vti1b coding upstream 312707 43060008 ~ 43073929 (+)
zfyve26 LOC106611478 coding upstream 347449 42918937 ~ 43039187 (+)
LOC110504345 LOC106611472 coding upstream 498492 42868981 ~ 42888144 (+)
trip11 trip11 coding upstream 531367 42797481 ~ 42855269 (+)
plekhd1 plekhd1 coding downstream 22425 43410955 ~ 43436311 (+)
LOC118944278 LOC106591229 coding downstream 81165 43469695 ~ 43470614 (+)
LOC118944350 NA coding downstream 327584 43716114 ~ 43716793 (+)
LOC118944157 LOC106591229 coding downstream 358115 43746645 ~ 43747748 (+)
LOC118944159 LOC106591229 coding downstream 377742 43766272 ~ 43767362 (+)
G1984682 NA non-coding upstream 41767 43334273 ~ 43344869 (+)
G1984666 NA non-coding upstream 73625 43312632 ~ 43313011 (+)
G1984650 NA non-coding upstream 80758 43297643 ~ 43305878 (+)
G1984654 NA non-coding upstream 92250 43259810 ~ 43294386 (+)
G1984651 NA non-coding upstream 112218 43247347 ~ 43274418 (+)
G1984724 NA non-coding downstream 13555 43402085 ~ 43408977 (+)
G1984733 NA non-coding downstream 33457 43421987 ~ 43429153 (+)
G1984710 NA non-coding downstream 49647 43438177 ~ 43438844 (+)
G1984741 NA non-coding downstream 53566 43442096 ~ 43442927 (+)
G1984745 NA non-coding downstream 63201 43451731 ~ 43451972 (+)
G1984431 NA other upstream 343318 43042681 ~ 43043318 (+)
G1984581 NA other upstream 411362 42964604 ~ 42975274 (+)
LOC110505989 NA other upstream 658687 42722700 ~ 42728639 (+)
cn112 cn112 other upstream 932813 42419107 ~ 42454007 (+)
G1983836 NA other upstream 1123922 42262227 ~ 42262714 (+)
G1984764 NA other downstream 83026 43471556 ~ 43472009 (+)
G1984797 NA other downstream 185513 43574043 ~ 43574613 (+)
G1984803 NA other downstream 225018 43613548 ~ 43635501 (+)
G1984807 NA other downstream 239462 43627992 ~ 43628808 (+)
G1984810 LOC106591229 other downstream 245302 43633832 ~ 43634426 (+)

Expression



Co-expression Network