Gene
RNA
| Item | Value |
|---|---|
| gene id | G1984724 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048589.1 |
| NCBI id | CM023243.3 |
| chromosome length | 47542702 |
| location | 43402085 ~ 43408977 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2269204 | True | 332 | lncRNA | 0.45 | 2 | 43402085 | 43408977 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110505947 | LOC106591369 | coding | upstream | 6769 | 43376094 ~ 43395316 (+) |
| LOC110506001 | rbm25 | coding | upstream | 249520 | 43110612 ~ 43152565 (+) |
| vti1b | vti1b | coding | upstream | 328156 | 43060008 ~ 43073929 (+) |
| zfyve26 | LOC106611478 | coding | upstream | 362898 | 42918937 ~ 43039187 (+) |
| LOC110504345 | LOC106611472 | coding | upstream | 513941 | 42868981 ~ 42888144 (+) |
| plekhd1 | plekhd1 | coding | downstream | 1978 | 43410955 ~ 43436311 (+) |
| LOC118944278 | LOC106591229 | coding | downstream | 60718 | 43469695 ~ 43470614 (+) |
| LOC118944350 | NA | coding | downstream | 307137 | 43716114 ~ 43716793 (+) |
| LOC118944157 | LOC106591229 | coding | downstream | 337668 | 43746645 ~ 43747748 (+) |
| LOC118944159 | LOC106591229 | coding | downstream | 357295 | 43766272 ~ 43767362 (+) |
| G1984719 | NA | non-coding | upstream | 13555 | 43386636 ~ 43388530 (+) |
| G1984682 | NA | non-coding | upstream | 57216 | 43334273 ~ 43344869 (+) |
| G1984666 | NA | non-coding | upstream | 89074 | 43312632 ~ 43313011 (+) |
| G1984650 | NA | non-coding | upstream | 96207 | 43297643 ~ 43305878 (+) |
| G1984654 | NA | non-coding | upstream | 107699 | 43259810 ~ 43294386 (+) |
| G1984733 | NA | non-coding | downstream | 13010 | 43421987 ~ 43429153 (+) |
| G1984710 | NA | non-coding | downstream | 29200 | 43438177 ~ 43438844 (+) |
| G1984741 | NA | non-coding | downstream | 33119 | 43442096 ~ 43442927 (+) |
| G1984745 | NA | non-coding | downstream | 42754 | 43451731 ~ 43451972 (+) |
| G1984714 | NA | non-coding | downstream | 54544 | 43463521 ~ 43464116 (+) |
| G1984431 | NA | other | upstream | 358767 | 43042681 ~ 43043318 (+) |
| G1984581 | NA | other | upstream | 426811 | 42964604 ~ 42975274 (+) |
| LOC110505989 | NA | other | upstream | 674136 | 42722700 ~ 42728639 (+) |
| cn112 | cn112 | other | upstream | 948262 | 42419107 ~ 42454007 (+) |
| G1983836 | NA | other | upstream | 1139371 | 42262227 ~ 42262714 (+) |
| G1984764 | NA | other | downstream | 62579 | 43471556 ~ 43472009 (+) |
| G1984797 | NA | other | downstream | 165066 | 43574043 ~ 43574613 (+) |
| G1984803 | NA | other | downstream | 204571 | 43613548 ~ 43635501 (+) |
| G1984807 | NA | other | downstream | 219015 | 43627992 ~ 43628808 (+) |
| G1984810 | LOC106591229 | other | downstream | 224855 | 43633832 ~ 43634426 (+) |
