G1984733


Basic Information

Item Value
gene id G1984733
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048589.1
NCBI id CM023243.3
chromosome length 47542702
location 43421987 ~ 43429153 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2269213
aaatgatgtaagacaattgatgtatggatgactcatagtgaagactgggttcgtgcagataaccaacaatttacaacgtttggaatgagactaacgtgaggtaaagaataattaattCATCAGAAGACTAAGttatcagatattaaaatatctgaagagttatattaggaaaattctaactttgtaatctgaatattttccttggttccccgacttcctagttaattacagttacacgattaagtagtttaatcacgtaataataa

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2269213 True 266 lncRNA 0.31 2 43421987 43429153

Neighbor

gene id symbol gene type direction distance location
LOC110505947 LOC106591369 coding upstream 26671 43376094 ~ 43395316 (+)
LOC110506001 rbm25 coding upstream 269422 43110612 ~ 43152565 (+)
vti1b vti1b coding upstream 348058 43060008 ~ 43073929 (+)
zfyve26 LOC106611478 coding upstream 382800 42918937 ~ 43039187 (+)
LOC110504345 LOC106611472 coding upstream 533843 42868981 ~ 42888144 (+)
LOC118944278 LOC106591229 coding downstream 40542 43469695 ~ 43470614 (+)
LOC118944350 NA coding downstream 286961 43716114 ~ 43716793 (+)
LOC118944157 LOC106591229 coding downstream 317492 43746645 ~ 43747748 (+)
LOC118944159 LOC106591229 coding downstream 337119 43766272 ~ 43767362 (+)
LOC118944282 LOC106591229 coding downstream 367675 43725448 ~ 43797824 (+)
G1984724 NA non-coding upstream 13010 43402085 ~ 43408977 (+)
G1984719 NA non-coding upstream 33457 43386636 ~ 43388530 (+)
G1984682 NA non-coding upstream 77118 43334273 ~ 43344869 (+)
G1984666 NA non-coding upstream 108976 43312632 ~ 43313011 (+)
G1984650 NA non-coding upstream 116109 43297643 ~ 43305878 (+)
G1984710 NA non-coding downstream 9024 43438177 ~ 43438844 (+)
G1984741 NA non-coding downstream 12943 43442096 ~ 43442927 (+)
G1984745 NA non-coding downstream 22578 43451731 ~ 43451972 (+)
G1984714 NA non-coding downstream 34368 43463521 ~ 43464116 (+)
G1984761 NA non-coding downstream 38481 43467634 ~ 43468046 (+)
G1984431 NA other upstream 378669 43042681 ~ 43043318 (+)
G1984581 NA other upstream 446713 42964604 ~ 42975274 (+)
LOC110505989 NA other upstream 694038 42722700 ~ 42728639 (+)
cn112 cn112 other upstream 968164 42419107 ~ 42454007 (+)
G1983836 NA other upstream 1159273 42262227 ~ 42262714 (+)
G1984764 NA other downstream 42403 43471556 ~ 43472009 (+)
G1984797 NA other downstream 144890 43574043 ~ 43574613 (+)
G1984803 NA other downstream 184395 43613548 ~ 43635501 (+)
G1984807 NA other downstream 198839 43627992 ~ 43628808 (+)
G1984810 LOC106591229 other downstream 204679 43633832 ~ 43634426 (+)

Expression


Co-expression Network