G1984745


Basic Information

Item Value
gene id G1984745
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048589.1
NCBI id CM023243.3
chromosome length 47542702
location 43451731 ~ 43451972 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2269227
CTAGGACCAGAAAGCTGAAAGCAGATCACTACCTCTAATCTACTGCTGATAATATGATTAATCCTTCCACATTTTGGCAAGTAGTGAAAGGTAAACAACTGCTGGGATTGACTCACAGCTGGTAGAGAACCTCTGTTCTTAACTCTTTTCAATCAAAATGTTCTTGATGCAAGCTGATTATTtgctataacagcctcccctcttctgtgcaggcttttcac

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2269227 True 221 lncRNA 0.41 2 43451731 43451972

Neighbor

gene id symbol gene type direction distance location
plekhd1 plekhd1 coding upstream 15420 43410955 ~ 43436311 (+)
LOC110505947 LOC106591369 coding upstream 56415 43376094 ~ 43395316 (+)
LOC110506001 rbm25 coding upstream 299166 43110612 ~ 43152565 (+)
vti1b vti1b coding upstream 377802 43060008 ~ 43073929 (+)
zfyve26 LOC106611478 coding upstream 412544 42918937 ~ 43039187 (+)
LOC118944278 LOC106591229 coding downstream 17723 43469695 ~ 43470614 (+)
LOC118944350 NA coding downstream 264142 43716114 ~ 43716793 (+)
LOC118944157 LOC106591229 coding downstream 294673 43746645 ~ 43747748 (+)
LOC118944159 LOC106591229 coding downstream 314300 43766272 ~ 43767362 (+)
LOC118944282 LOC106591229 coding downstream 344856 43725448 ~ 43797824 (+)
G1984741 NA non-coding upstream 8804 43442096 ~ 43442927 (+)
G1984710 NA non-coding upstream 12887 43438177 ~ 43438844 (+)
G1984733 NA non-coding upstream 22578 43421987 ~ 43429153 (+)
G1984724 NA non-coding upstream 42754 43402085 ~ 43408977 (+)
G1984719 NA non-coding upstream 63201 43386636 ~ 43388530 (+)
G1984714 NA non-coding downstream 11549 43463521 ~ 43464116 (+)
G1984761 NA non-coding downstream 15662 43467634 ~ 43468046 (+)
G1984765 NA non-coding downstream 30919 43482891 ~ 43483377 (+)
G1984770 NA non-coding downstream 38455 43490427 ~ 43490746 (+)
G1984773 NA non-coding downstream 47976 43499948 ~ 43500702 (+)
G1984431 NA other upstream 408413 43042681 ~ 43043318 (+)
G1984581 NA other upstream 476457 42964604 ~ 42975274 (+)
LOC110505989 NA other upstream 723782 42722700 ~ 42728639 (+)
cn112 cn112 other upstream 997908 42419107 ~ 42454007 (+)
G1983836 NA other upstream 1189017 42262227 ~ 42262714 (+)
G1984764 NA other downstream 19584 43471556 ~ 43472009 (+)
G1984797 NA other downstream 122071 43574043 ~ 43574613 (+)
G1984803 NA other downstream 161576 43613548 ~ 43635501 (+)
G1984807 NA other downstream 176020 43627992 ~ 43628808 (+)
G1984810 LOC106591229 other downstream 181860 43633832 ~ 43634426 (+)

Expression


Co-expression Network