G1984765


Basic Information

Item Value
gene id G1984765
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048589.1
NCBI id CM023243.3
chromosome length 47542702
location 43482891 ~ 43483377 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2269254
CATCCCTCTATAAGATCACTGAGATGAGTTGATGAGAAGCCACATCTAATTCACGTGGAGTGGTTTGTCTGTCTCATTCTTTCTGTCTCCTTAACAGTGAGTCAACATGATCAGAATTCTTATCTCCATCACCATGGGTTACACAGCCTGGGCTGCAGtttctTCTCTCAGTAACCAGGTTCACCAAACACCTGCAGGCCTGTACAAGAACCAGGGAGAGTTGGCTAAGATGGAGTGTTCACATAGTATATCAACCTATAATCGTATCCTCTGGTACAAGCAATCCAACTACAGAGAATTTGTGTTTTTAGGATACATGACAGCAAAAACTGGATTTCCTGAGGCTGGATT

Function

NR:

description
T cell receptor beta chain variable region, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2269254 True 351 lncRNA 0.43 2 43482891 43483377

Neighbor

gene id symbol gene type direction distance location
LOC118944278 LOC106591229 coding upstream 12277 43469695 ~ 43470614 (+)
plekhd1 plekhd1 coding upstream 46580 43410955 ~ 43436311 (+)
LOC110505947 LOC106591369 coding upstream 87575 43376094 ~ 43395316 (+)
LOC110506001 rbm25 coding upstream 330326 43110612 ~ 43152565 (+)
vti1b vti1b coding upstream 408962 43060008 ~ 43073929 (+)
LOC118944350 NA coding downstream 232737 43716114 ~ 43716793 (+)
LOC118944157 LOC106591229 coding downstream 263268 43746645 ~ 43747748 (+)
LOC118944159 LOC106591229 coding downstream 282895 43766272 ~ 43767362 (+)
LOC118944282 LOC106591229 coding downstream 313451 43725448 ~ 43797824 (+)
LOC118944162 LOC106591229 coding downstream 411617 43894994 ~ 43895838 (+)
G1984761 NA non-coding upstream 14845 43467634 ~ 43468046 (+)
G1984714 NA non-coding upstream 18775 43463521 ~ 43464116 (+)
G1984745 NA non-coding upstream 30919 43451731 ~ 43451972 (+)
G1984741 NA non-coding upstream 39964 43442096 ~ 43442927 (+)
G1984710 NA non-coding upstream 44047 43438177 ~ 43438844 (+)
G1984770 NA non-coding downstream 7050 43490427 ~ 43490746 (+)
G1984773 NA non-coding downstream 16571 43499948 ~ 43500702 (+)
G1984778 NA non-coding downstream 26226 43509603 ~ 43510393 (+)
G1984795 NA non-coding downstream 79537 43562914 ~ 43563235 (+)
G1984799 NA non-coding downstream 97943 43581320 ~ 43581667 (+)
G1984764 NA other upstream 10882 43471556 ~ 43472009 (+)
G1984431 NA other upstream 439573 43042681 ~ 43043318 (+)
G1984581 NA other upstream 507617 42964604 ~ 42975274 (+)
LOC110505989 NA other upstream 754942 42722700 ~ 42728639 (+)
cn112 cn112 other upstream 1029068 42419107 ~ 42454007 (+)
G1984797 NA other downstream 90666 43574043 ~ 43574613 (+)
G1984803 NA other downstream 130171 43613548 ~ 43635501 (+)
G1984807 NA other downstream 144615 43627992 ~ 43628808 (+)
G1984810 LOC106591229 other downstream 150455 43633832 ~ 43634426 (+)
G1984821 NA other downstream 174433 43657810 ~ 43672280 (+)

Expression


Co-expression Network