G1984803


Basic Information

Item Value
gene id G1984803
gene name NA
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048589.1
NCBI id CM023243.3
chromosome length 47542702
location 43613548 ~ 43635501 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2269300
CTCTTCTCTCCAGAACCATCAACATGATCAAGCTTCTCATACATGTAGCAACTCTACCACTATGGGTGACAGGGCTGTCACAAACAGACAAAGTTCACCAGACTCCTACTGCAATACTAAAAGGACCTGAAGACAAAGTTAATCTCTCCTGCAGCCACACTGATTCAAATTACAACATGATACTGTGGTACCAACAGTCAGCCCAAAACACTGCTCTGAAACTCATTGGGTATGTGTGGAACACCAGTCCAACGGTGGAAGATTCCTTTAAAGGGCGTTTTGATGTCAGTGGAGATGCTGCAGCTAATAAAATGGCGTATCTACATTTTCCCAAAGTGCCAGAAGCTGAAGACAGTGCAGTGTATTTCTGTGCTGCTAGTAAAG
>TU2269301
GAACCATCAACATGATCAAGCTTCTCATACATGTAGCAACTCTACCACTATGGGTTACAGGGCTGTCACAAACAGACAAAGTTCACCAGACTCCTACTGCAATACTAAAAGGACCTGAAGACAAAGTTAATCTCTCCTGCAGCCACACTGATTCAAATTACAACATGATACTGTGGTACCAACAGTCAGCCCAAAACACTGCTCTGAAACTCATTGGGTATGTGTGGAACACCAGTCCAACGGTGGAAGATTCCTTTAAAGGGCGTTTTGATGTCAGTGGAGATGCTGCAGCTAATAAAATGGCGTATCTACATTTTCCCAAAGTGCCAGAAGCTGAAGACAGTGCAGTGTATTTCTGTGCTGCTAGTAAAG

Function

NR:

description
unnamed protein product

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU2269300 False 384 TUCP 0.44 2 43613548 43635501
TU2269301 True 372 TUCP 0.44 2 43635029 43635501

Neighbor

gene id symbol gene type direction distance location
LOC118944278 LOC106591229 coding upstream 142934 43469695 ~ 43470614 (+)
plekhd1 plekhd1 coding upstream 177237 43410955 ~ 43436311 (+)
LOC110505947 LOC106591369 coding upstream 218232 43376094 ~ 43395316 (+)
LOC110506001 rbm25 coding upstream 460983 43110612 ~ 43152565 (+)
vti1b vti1b coding upstream 539619 43060008 ~ 43073929 (+)
LOC118944350 NA coding downstream 80613 43716114 ~ 43716793 (+)
LOC118944157 LOC106591229 coding downstream 111144 43746645 ~ 43747748 (+)
LOC118944159 LOC106591229 coding downstream 130771 43766272 ~ 43767362 (+)
LOC118944282 LOC106591229 coding downstream 161327 43725448 ~ 43797824 (+)
LOC118944162 LOC106591229 coding downstream 259493 43894994 ~ 43895838 (+)
G1984801 NA non-coding upstream 5153 43607429 ~ 43608395 (+)
G1984799 NA non-coding upstream 31881 43581320 ~ 43581667 (+)
G1984795 NA non-coding upstream 50313 43562914 ~ 43563235 (+)
G1984778 NA non-coding upstream 103155 43509603 ~ 43510393 (+)
G1984773 NA non-coding upstream 112846 43499948 ~ 43500702 (+)
G1984873 NA non-coding downstream 243639 43879140 ~ 43879515 (+)
LOC110505949 NA non-coding downstream 339461 43966017 ~ 43985188 (+)
G1984895 NA non-coding downstream 350683 43986184 ~ 43986397 (+)
G1984897 NA non-coding downstream 353976 43989477 ~ 43989681 (+)
G1984797 NA other upstream 38935 43574043 ~ 43574613 (+)
G1984764 NA other upstream 141539 43471556 ~ 43472009 (+)
G1984431 NA other upstream 570230 43042681 ~ 43043318 (+)
G1984581 NA other upstream 638274 42964604 ~ 42975274 (+)
LOC110505989 NA other upstream 885599 42722700 ~ 42728639 (+)
G1984821 NA other downstream 22309 43657810 ~ 43672280 (+)
G1984843 NA other downstream 112665 43748166 ~ 43748632 (+)
G1984830 NA other downstream 116676 43752177 ~ 43758854 (+)
G1984775 NA other downstream 135654 43771155 ~ 43771748 (+)
G1984853 NA other downstream 162838 43798339 ~ 43798806 (+)

Expression


Co-expression Network