G1984807


Basic Information

Item Value
gene id G1984807
gene name NA
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048589.1
NCBI id CM023243.3
chromosome length 47542702
location 43627992 ~ 43628808 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2269305
GCATCCCTCTATAAGATCACTGAGATGAGTTGATGAGAAGCCTCCTCTAATTCATGTGGAGTGGTTTGTCTGTCTCATTCTTTCTGTCTCCTTAACAGTGGGTCAACATGATCAGAATTCTTATCTCCATCACCATGGGTTACACAGCCTGGGCTGCAGGTTCTTCTCTCAGTAATCAGGTCCACCAAACACCTGCAGACCTGTACAAGAACCAGGGAGAGTTGGCTAAGATGGAGTGTTCACATAGTATATCAGGCTACAATCGTATCCTCTGGTACAAGCAATCCAACTACAGAGAGTTAGTGCTAATAGGATACATGATAGGGACAGCTGGATATCCTGAGGCTGGATTTGATATAGAAGGAGATGCTAATGCAGGTGGTACCAGCACCTTAACCATCAAACAACTAACTCCAAATAGCAGtgctgtgtattactgtgctgCTAGTTTAC

Function

NR:

description
T-cell receptor beta chain 2 variable region, partial

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU2269305 True 453 TUCP 0.44 2 43627992 43628808

Neighbor

gene id symbol gene type direction distance location
LOC118944278 LOC106591229 coding upstream 157378 43469695 ~ 43470614 (+)
plekhd1 plekhd1 coding upstream 191681 43410955 ~ 43436311 (+)
LOC110505947 LOC106591369 coding upstream 232676 43376094 ~ 43395316 (+)
LOC110506001 rbm25 coding upstream 475427 43110612 ~ 43152565 (+)
vti1b vti1b coding upstream 554063 43060008 ~ 43073929 (+)
LOC118944350 NA coding downstream 87306 43716114 ~ 43716793 (+)
LOC118944157 LOC106591229 coding downstream 117837 43746645 ~ 43747748 (+)
LOC118944159 LOC106591229 coding downstream 137464 43766272 ~ 43767362 (+)
LOC118944282 LOC106591229 coding downstream 168020 43725448 ~ 43797824 (+)
LOC118944162 LOC106591229 coding downstream 266186 43894994 ~ 43895838 (+)
G1984801 NA non-coding upstream 19597 43607429 ~ 43608395 (+)
G1984799 NA non-coding upstream 46325 43581320 ~ 43581667 (+)
G1984795 NA non-coding upstream 64757 43562914 ~ 43563235 (+)
G1984778 NA non-coding upstream 117599 43509603 ~ 43510393 (+)
G1984773 NA non-coding upstream 127290 43499948 ~ 43500702 (+)
G1984873 NA non-coding downstream 250332 43879140 ~ 43879515 (+)
LOC110505949 NA non-coding downstream 346154 43966017 ~ 43985188 (+)
G1984895 NA non-coding downstream 357376 43986184 ~ 43986397 (+)
G1984897 NA non-coding downstream 360669 43989477 ~ 43989681 (+)
G1984797 NA other upstream 53379 43574043 ~ 43574613 (+)
G1984764 NA other upstream 155983 43471556 ~ 43472009 (+)
G1984431 NA other upstream 584674 43042681 ~ 43043318 (+)
G1984581 NA other upstream 652718 42964604 ~ 42975274 (+)
LOC110505989 NA other upstream 900043 42722700 ~ 42728639 (+)
G1984810 LOC106591229 other downstream 5024 43633832 ~ 43634426 (+)
G1984821 NA other downstream 29002 43657810 ~ 43672280 (+)
G1984843 NA other downstream 119358 43748166 ~ 43748632 (+)
G1984830 NA other downstream 123369 43752177 ~ 43758854 (+)
G1984775 NA other downstream 142347 43771155 ~ 43771748 (+)

Expression


Co-expression Network