G1985022


Basic Information

Item Value
gene id G1985022
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048589.1
NCBI id CM023243.3
chromosome length 47542702
location 44329422 ~ 44332050 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2269556
TCATTATACCAACATTATTTATTTATCAAACAACATATAGGGTACTTTAACTTTACGCAAAATCCAAGCAGATTTTAGTTTTATAATATTTACATGACATCCCAAAGACAAAAACGAAACATTATTTGGGCAAAACAACAAATACCGTTCCTGAAAATGCTTtgacactttattttaaaaacagCTATTCAGTGAAATATACACATTTTGCAATTTGTTGTCCGGCATTTATTGACAGACACTAAAATGTGAAATGTGCAAGAAACAGTTGAAGTTGGGAAAAGCTACAGTAGGAAGAAACCACAACATCCGAGAGGATGAAGACCTCTGACAGGTAACACCTGGTTCTGGTATTCACAGTAGGagagcagatctaggatcaggtccccccaggtcattatgatctaggatcaggtctcccaggtcattatgatctaggatcaggtcccccaggtcattatgatctaggatcaggtccctcaggtcattatgatctaggatcaggtcccccaggTCATTATGATCTTCTCCCCAGCCACCAgagttcctcctcttcctcctcctctccccagccagagttcctcctcctcttcctcttccccctaGCCACCAgagttcctcctcttcctcctcctcctctccccagccaccagagttcctcctcctcctcctcctcctcttctccccagccACCAgagttcctcctctccctcctcctctccccagccaccagaGTTCCTCCTACTCTTCTCTCCGGCCACCAGGTTTCAGGTAATCAGGTGATGAGTTGTGGCTCCCAGACCTGACTGGCCAGCTGGGGCCGACACTGAGTGATGGCAGGAGGGCCAACAGACAGCTGACTGTCAAGACACAGACCACTAACCACGTGCTGCAGGGTCGGCCCTTTTA
>TU2269558
TCATTATACCAACATTATTTATTTATCAAACAACATATAGGGTACTTTAACTTTACGCAAAATCCAAGCAGATTTTAGTTTTATAATATTTACATGACATCCCAAAGACAAAAACGAAACATTATTTGGGCAAAACAACAAATACCGTTCCTGAAAATGCTTtgacactttattttaaaaacagCTATTCAGTGAAATATACACATTTTGCAATTTGTTGTCCGGCATTTATTGACAGACACTAAAATGTGAAATGTGCAAGAAACAGTTGAAGTTGGGAAAAGCTACAGTAGGAAGAAACCACAACATCCGAGAGGATGAAGACCTCTGACAGGTAACACCTGGTTCTGGTATTCACAGTAGGagagcagatctaggatcaggtccccccaggtcattatgatctaggatcaggtctcccaggtcattatgatctaggatcaggtctcccaggtcattatgatctaggatcaggtctcccaggtcattatgatctaggatcaagtccccccaggtcattatgatctaggatcaggtcccccaggtcattatgatctaggatcaggtctcccaggtcattatgatctaggatcaggtctcccaggtcattatgatctaggatcaggtctcccaggtcattatgatctagg
>TU2269560
TCATTATACCAACATTATTTATTTATCAAACAACATATAGGGTACTTTAACTTTACGCAAAATCCAAGCAGATTTTAGTTTTATAATATTTACATGACATCCCAAAGACAAAAACGAAACATTATTTGGGCAAAACAACAAATACCGTTCCTGAAAATGCTTtgacactttattttaaaaacagCTATTCAGTGAAATATACACATTTTGCAATTTGTTGTCCGGCATTTATTGACAGACACTAAAATGTGAAATGTGCAAGAAACAGTTGAAGTTGGGAAAAGCTACAGTAGGAAGAAACCACAACATCCGAGAGGATGAAGACCTCTGACAGGTAACACCTGGTTCTGGTATTCACAGTAGGagagcagatctaggatcaggtccccccaggtcattatgatctaggatcaggtctcccaggtcattatgatctaggatcaggtctcccaggtcattatgatctaggatcaggtctcccaggtcattatgatctaggatcaggtcccccaggtcattatgatctaggatcaggtcccccaggtcattatgatctaggatcaggtctcccaggtcattatgatctaggatcaggtcccccaggtcattatgatctaggatcaggtcccatatgtcattatgatctaggatcaggtcccccaggtcattatgatctaggatcaggtctcccaggtcattatgatctaggatcaggtccccccaggtcattatgatctaggatcaggtctcccaggtcattatgatctaggatcaggtcccccaggtcattatgatctaggatcaggtccctcaggtcattatgatctaggatcaggtcccccaggTCATTATGATCTTCTCCCCAGCCACCAgagttcctcctcttcctcctcctctccccagccagagttcctcctcctcttccccctagCCACCAgagttcctcctcttcctcctcctcctctccccagcCACCagagttcctcctcctcctcctcctcttctccccagccACCAgagttcctcctctccctcctcttctccccagccACCAgagttcctcctctccctcctcctctccccagccaccagaGTTCCTCCTACTCTTCTCTCCGGCCACCAGGTTTCAGGTAATCAGGTGATGAGTTGTGGCTCCCAGACCTGACTGGCCAGCTGGGGCCGACACTGAGTGATGGCAGGAGGGCCAACAGACAGCTGACTGTCAAGACACAGACCACTAACCACGTGCTGCAGGGTCGGCCCTTTTA
>TU2269562
TCATTATACCAACATTATTTATTTATCAAACAACATATAGGGTACTTTAACTTTACGCAAAATCCAAGCAGATTTTAGTTTTATAATATTTACATGACATCCCAAAGACAAAAACGAAACATTATTTGGGCAAAACAACAAATACCGTTCCTGAAAATGCTTtgacactttattttaaaaacagCTATTCAGTGAAATATACACATTTTGCAATTTGTTGTCCGGCATTTATTGACAGACACTAAAATGTGAAATGTGCAAGAAACAGTTGAAGTTGGGAAAAGCTACAGTAGGAAGAAACCACAACATCCGAGAGGATGAAGACCTCTGACAGGTAACACCTGGTTCTGGTATTCACAGTAGGagagcagatctaggatcaggtccccccaggtcattatgatctaggatcaggtctcccaggtcattatgatctaggatcaggtctccccaggtcattatgatctaggatcaggtcccatatgtcattatgatctaggatcaggtcccccaggtcattatgatctaggatcaggtctcccaggtcattatgatctaggatcaggtccccccaggtcattatgatctaggatcaggtctcccaggtcattatgatctaggatcaggtcccccaggtcattatgatctaggatcaggtccctcaggtcattatgatctaggatcaggtcccccaggTCATTATGATCTTCTCCCCAGCCACCAgagttcctcctcttcctcctcctctccccagccagagttcctcctcctcttccccctagCCACCAgagttcctcctcttcctcctcctcctctccccagcCACCagagttcctcctcctcctcctcctcttctccccagccACCAgagttcctcctctccctcctcttctccccagccACCAgagttcctcctctccctcctcctctccccagccaccagaGTTCCTCCTACTCTTCTCTCCGGCCACCAGGTTTCAGGTAATCAGGTGATGAGTTGTGGCTCCCAGACCTGACTGGCCAGCTGGGGCCGACACTGAGTGATGGCAGGAGGGCCAACAGACAGCTGACTGTCAAGACACAGACCACTAACCACGTGCTGCAGGGTCGGCCCTTTTA
>TU2269564
TCATTATACCAACATTATTTATTTATCAAACAACATATAGGGTACTTTAACTTTACGCAAAATCCAAGCAGATTTTAGTTTTATAATATTTACATGACATCCCAAAGACAAAAACGAAACATTATTTGGGCAAAACAACAAATACCGTTCCTGAAAATGCTTtgacactttattttaaaaacagCTATTCAGTGAAATATACACATTTTGCAATTTGTTGTCCGGCATTTATTGACAGACACTAAAATGTGAAATGTGCAAGAAACAGTTGAAGTTGGGAAAAGCTACAGTAGGAAGAAACCACAACATCCGAGAGGATGAAGACCTCTGACAGGTAACACCTGGTTCTGGTATTCACAGTAGGagagcagatctaggatcaggtcccccaggtcattatgatctaggatcaggtctcccaggtcattatgatctaggatcaggtccccccaggtcattatgatctaggatcaggtctcccaggtcattatgatctaggatcaggtccccccaggtcattatgatctaggatcaggtccctcaggtcattatgatctaggatcaggtcccccaggtcattatgatctaggatcaggtctcccaggtcattatgatctaggatcaggtccccccaggtcattatgatctaggatcaggtctcccaggtcattatgatctaggatcaggtcccccaggtcattatgatctaggatcaggtccctcaggtcattatgatctaggatcaggtcccccaggTCATTATGATCTTCTCCCCAGCCACCAgagttcctcctcttcctcctcctctccccagccagagttcctcctcctcttccccctagCCACCAgagttcctcctcttcctcctcctcctctccccagcCACCagagttcctcctcctcctcctcctcttctccccagccACCAgagttcctcctctccctcctcttctccccagccACCAgagttcctcctctccctcctcctctccccagccaccagaGTTCCTCCTACTCTTCTCTCCGGCCACCAGGTTTCAGGTAATCAGGTGATGAGTTGTGGCTCCCAGACCTGACTGGCCAGCTGGGGCCGACACTGAGTGATGGCAGGAGGGCCAACAGACAGCTGACTGTCAAGACACAGACCACTAACCACGTGCTGCAGGGTCGGCCCTTTTA
>TU2269565
TCATTATACCAACATTATTTATTTATCAAACAACATATAGGGTACTTTAACTTTACGCAAAATCCAAGCAGATTTTAGTTTTATAATATTTACATGACATCCCAAAGACAAAAACGAAACATTATTTGGGCAAAACAACAAATACCGTTCCTGAAAATGCTTtgacactttattttaaaaacagCTATTCAGTGAAATATACACATTTTGCAATTTGTTGTCCGGCATTTATTGACAGACACTAAAATGTGAAATGTGCAAGAAACAGTTGAAGTTGGGAAAAGCTACAGTAGGAAGAAACCACAACATCCGAGAGGATGAAGACCTCTGACAGGTAACACCTGGTTCTGGTATTCACAGTAGGagagcagatctaggatcaggtccccccaggtcattatgatctaggatcaggtctcccaggtcattatgatctaggatcaggtctcccaggtcattatgatctaggatcaggtctcccaggtcattatgatctaggatcaggtcccccaggtcattatgatctaggatcaggtcccccaggtcattatgatctaggatcaggtctcccaggtcattatgatctaggatcaggtcccccaggtcattatgatctaggatcaggtctcccaggtcattatgatctaggatcaggtccccccaggtcattatgatctaggatcaggtctcccaggtcattatgatctaggatcaggtcccccaggtcattatgatctaggatcaggtccctcaggtcattatgatctaggatcaggtcccccaggTCATTATGATCTTCTCCCCAGCCACCAgagttcctcctcttcctcctcctctccccagccagagttcctcctcctcttccccctagCCACCAgagttcctcctcttcctcctcctcctctccccagcCACCagagttcctcctcctcctcctcctcttctccccagccACCAgagttcctcctctccctcctcttctccccagccACCAgagttcctcctctccctcctcctctccccagccaccagaGTTCCTCCTACTCTTCTCTCCGGCCACCAGGTTTCAGGTAATCAGGTGATGAGTTGTGGCTCCCAGACCTGACTGGCCAGCTGGGGCCGACACTGAGTGATGGCAGGAGGGCCAACAGACAGCTGACTGTCAAGACACAGACCACTAACCACGTGCTGCAGGGTCGGCCCTTTTA
>TU2269566
TCATTATACCAACATTATTTATTTATCAAACAACATATAGGGTACTTTAACTTTACGCAAAATCCAAGCAGATTTTAGTTTTATAATATTTACATGACATCCCAAAGACAAAAACGAAACATTATTTGGGCAAAACAACAAATACCGTTCCTGAAAATGCTTtgacactttattttaaaaacagCTATTCAGTGAAATATACACATTTTGCAATTTGTTGTCCGGCATTTATTGACAGACACTAAAATGTGAAATGTGCAAGAAACAGTTGAAGTTGGGAAAAGCTACAGTAGGAAGAAACCACAACATCCGAGAGGATGAAGACCTCTGACAGGTAACACCTGGTTCTGGTATTCACAGTAGGagagcagatctaggatcaggtccccccaggtcattatgatctaggatcaggtctcccaggtcattatgatctaggatcaggtctcccaggtcattatgatctaggatcaggtctcccaggtcattatgatctaggatcaggtcccccaggtcattatgatctaggatcaggtcccccaggtcattatgatctaggatcaggtctcccaggtcattatgatctaggatcaggtcccccaggtcattatgatctaggatcaggtcccatatgtcattatgatctaggatcaggtcccatatgtcattatgatctaggatcaggtcccccaggtcattatgatctaggatcaggtctcccaggtcattatgatctaggatcaggtccccccaggtcattatgatctaggatcaggtctcccaggtcattatgatctaggatcaggtcccccaggtcattatgatctaggatcaggtccctcaggtcattatgatctaggatcaggtcccccaggTCATTATGATCTTCTCCCCAGCCACCAgagttcctcctcttcctcctcctctccccagccagagttcctcctcctcttccccctagCCACCAgagttcctcctcttcctcctcctcctctccccagcCACCagagttcctcctcctcctcctcctcttctccccagccACCAgagttcctcctctccctcctcttctccccagccACCAgagttcctcctctccctcctcctctccccagccaccagaGTTCCTCCTACTCTTCTCTCCGGCCACCAGGTTTCAGGTAATCAGGTGATGAGTTGTGGCTCCCAGACCTGACTGGCCAGCTGGGGCCGACACTGAGTGATGGCAGGAGGGCCAACAGACAGCTGACTGTCAAGACACAGACCACTAACCACGTGCTGCAGGGTCGGCCCTTTTA
>TU2269567
TCATTATACCAACATTATTTATTTATCAAACAACATATAGGGTACTTTAACTTTACGCAAAATCCAAGCAGATTTTAGTTTTATAATATTTACATGACATCCCAAAGACAAAAACGAAACATTATTTGGGCAAAACAACAAATACCGTTCCTGAAAATGCTTtgacactttattttaaaaacagCTATTCAGTGAAATATACACATTTTGCAATTTGTTGTCCGGCATTTATTGACAGACACTAAAATGTGAAATGTGCAAGAAACAGTTGAAGTTGGGAAAAGCTACAGTAGGAAGAAACCACAACATCCGAGAGGATGAAGACCTCTGACAGGTAACACCTGGTTCTGGTATTCACAGTAGGagagcagatctaggatcaggtcccccaggtcattatgatctaggatcaggtctcccaggtcattatgatctaggatcaggtcccccaggtcattatgatctaggatcaggtccccaggtcattatgatctaggatcaggtcccatatgtcattatgatctaggatcaggtcccatatgtcattatgatctaggatcaggtcccccaggtcattatgatctaggatcaggtctcccaggtcattatgatctaggatcaggtccccccaggtcattatgatctaggatcaggtctcccaggtcattatgatctaggatcaggtcccccaggtcattatgatctaggatcaggtccctcaggtcattatgatctaggatcaggtcccccaggTCATTATGATCTTCTCCCCAGCCACCAgagttcctcctcttcctcctcctctccccagccagagttcctcctcctcttccccctagCCACCAgagttcctcctcttcctcctcctcctctccccagcCACCagagttcctcctcctcctcctcctcttctccccagccACCAgagttcctcctctccctcctcttctccccagccACCAgagttcctcctctccctcctcctctccccagccaccagaGTTCCTCCTACTCTTCTCTCCGGCCACCAGGTTTCAGGTAATCAGGTGATGAGTTGTGGCTCCCAGACCTGACTGGCCAGCTGGGGCCGACACTGAGTGATGGCAGGAGGGCCAACAGACAGCTGACTGTCAAGACACAGACCACTAACCACGTGCTGCAGGGTCGGCCCTTTTA

Function

NR:

description
PREDICTED: polypeptide N-acetylgalactosaminyltransferase 16-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2269556 False 909 lncRNA 0.48 3 44329422 44332050
TU2269558 False 650 lncRNA 0.40 2 44329422 44330676
TU2269560 False 1268 lncRNA 0.48 5 44329422 44332050
TU2269562 False 1119 lncRNA 0.48 4 44329422 44332050
TU2269564 False 1179 lncRNA 0.48 5 44329422 44332050
TU2269565 False 1208 lncRNA 0.48 5 44329422 44332050
TU2269566 False 1298 lncRNA 0.48 5 44329422 44332050
TU2269567 True 1176 lncRNA 0.48 4 44329422 44332050
Loading

Neighbor

gene id symbol gene type direction distance location
si:ch211-168d23.3 LOC106611429 coding upstream 157461 44127379 ~ 44171961 (+)
LOC110505943 ERH coding upstream 203651 44120232 ~ 44125771 (+)
LOC110505949 NA coding upstream 344287 43966017 ~ 43985188 (+)
LOC118944163 NA coding upstream 400099 43928793 ~ 43929323 (+)
LOC118944162 LOC106591229 coding upstream 433584 43894994 ~ 43895838 (+)
capn3a capn3 coding downstream 134579 44466629 ~ 44540551 (+)
nenf nenf coding downstream 283648 44615698 ~ 44630196 (+)
ezra NA coding downstream 302446 44634496 ~ 44668613 (+)
kcnk3b LOC106591395 coding downstream 340099 44672149 ~ 44675627 (+)
marc1 LOC106591396 coding downstream 362778 44694828 ~ 44719652 (+)
G1985021 NA non-coding upstream 2130 44327090 ~ 44327292 (+)
G1984929 NA non-coding upstream 147549 44174064 ~ 44181873 (+)
G1984931 NA non-coding upstream 151044 44176343 ~ 44178378 (+)
G1984957 NA non-coding upstream 180925 44143488 ~ 44148497 (+)
G1984953 NA non-coding upstream 207143 44121395 ~ 44122279 (+)
G1985026 NA non-coding downstream 5225 44337275 ~ 44337849 (+)
G1985047 NA non-coding downstream 44726 44376776 ~ 44377086 (+)
G1985051 NA non-coding downstream 53416 44385466 ~ 44385725 (+)
G1985053 NA non-coding downstream 57363 44389413 ~ 44390566 (+)
G1985054 NA non-coding downstream 61094 44393144 ~ 44394860 (+)
G1984979 NA other upstream 118703 44207263 ~ 44210719 (+)
G1984715 NA other upstream 393775 43934986 ~ 43935647 (+)
G1984871 NA other upstream 434858 43875084 ~ 43894564 (+)
G1984860 NA other upstream 511664 43817349 ~ 43817758 (+)
G1984853 NA other upstream 530616 43798339 ~ 43798806 (+)
G1985056 NA other downstream 59692 44391742 ~ 44392233 (+)
G1985127 NA other downstream 282602 44614652 ~ 44614943 (+)
G1985151 NA other downstream 366396 44698446 ~ 44699800 (+)
G1985304 NA other downstream 732458 45064508 ~ 45065138 (+)
G1985341 LOC106611468 other downstream 807600 45139650 ~ 45143361 (+)

Expression

G1985022 Expression in all Baseline Samples

Bar chart with 20 bars.
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 15.
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G1985022 Expression in each Bioproject

Bar chart with 16 bars.
G1985022 Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 400.
End of interactive chart.

Co-expression Network