Gene
RNA
| Item | Value |
|---|---|
| gene id | G1986803 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048589.1 |
| NCBI id | CM023243.3 |
| chromosome length | 47542702 |
| location | 45820908 ~ 45821796 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: NHS-like protein 2 isoform X2 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2272058 | True | 417 | lncRNA | 0.36 | 2 | 45820908 | 45821796 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| ap5s1 | ap5s1 | coding | upstream | 167427 | 45585850 ~ 45653481 (+) |
| LOC110513290 | cdc25b | coding | upstream | 193669 | 45608087 ~ 45627239 (+) |
| LOC110505982 | NA | coding | upstream | 542916 | 45257481 ~ 45278077 (+) |
| mrps26 | mrps26 | coding | upstream | 698133 | 45117175 ~ 45122775 (+) |
| dctn1b | dctn1 | coding | upstream | 777232 | 44921935 ~ 45043676 (+) |
| LOC110512895 | LOC105015915 | coding | downstream | 180783 | 46002579 ~ 46035412 (+) |
| fgfr3 | fgfr3 | coding | downstream | 961729 | 46783525 ~ 47007189 (+) |
| nsd2 | whsc1 | coding | downstream | 1363313 | 47185109 ~ 47256115 (+) |
| asmt2 | LOC106611414 | coding | downstream | 1479894 | 47301690 ~ 47404080 (+) |
| pgmrc2 | pgmrc2 | coding | downstream | 1606857 | 47428653 ~ 47444980 (+) |
| G1986790 | NA | non-coding | upstream | 36170 | 45782761 ~ 45784738 (+) |
| G1986784 | NA | non-coding | upstream | 43651 | 45776355 ~ 45777257 (+) |
| G1986751 | NA | non-coding | upstream | 125707 | 45694202 ~ 45695201 (+) |
| G1986738 | NA | non-coding | upstream | 178207 | 45642157 ~ 45642701 (+) |
| G1986806 | NA | non-coding | downstream | 4962 | 45826758 ~ 45827524 (+) |
| G1986815 | NA | non-coding | downstream | 18854 | 45840650 ~ 45842493 (+) |
| G1986823 | NA | non-coding | downstream | 31035 | 45852831 ~ 45880400 (+) |
| G1986827 | NA | non-coding | downstream | 37473 | 45859269 ~ 45879117 (+) |
| G1986849 | NA | non-coding | downstream | 132116 | 45953912 ~ 45954321 (+) |
| G1986701 | NA | other | upstream | 163604 | 45655289 ~ 45657304 (+) |
| G1986676 | NA | other | upstream | 268647 | 45551691 ~ 45552261 (+) |
| G1985349 | NA | other | upstream | 622171 | 45167947 ~ 45198737 (+) |
| G1985341 | LOC106611468 | other | upstream | 677547 | 45139650 ~ 45143361 (+) |
| G1985304 | NA | other | upstream | 755770 | 45064508 ~ 45065138 (+) |
| G1986839 | NA | other | downstream | 82906 | 45904702 ~ 45906237 (+) |
| G1986924 | NA | other | downstream | 306171 | 46127967 ~ 46128518 (+) |
| G1987065 | NA | other | downstream | 678727 | 46500523 ~ 46500868 (+) |
| G1987081 | NA | other | downstream | 685326 | 46507122 ~ 46508601 (+) |
| G1987095 | NA | other | downstream | 709869 | 46526986 ~ 46537264 (+) |
