Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC118944456 |
| gene name | NA |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048590.1 |
| NCBI id | CM023244.2 |
| chromosome length | 51113553 |
| location | 4739916 ~ 4741747 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XR_005039793.1 | True | 302 | mRNA | 0.44 | 3 | 4739916 | 4741747 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118944435 | LOC106588010 | coding | downstream | 39432 | 4439833 ~ 4700484 (-) |
| LOC110498670 | anx2a | coding | downstream | 348923 | 4370382 ~ 4390993 (-) |
| LOC110516700 | LOC106591035 | coding | downstream | 581872 | 4074045 ~ 4158044 (-) |
| LOC110506223 | LOC106588037 | coding | downstream | 1247166 | 3477158 ~ 3492750 (-) |
| LOC118944414 | NA | coding | downstream | 1554124 | 3183940 ~ 3186858 (-) |
| LOC110525056 | LOC106592677 | coding | upstream | 232042 | 4973789 ~ 4975290 (-) |
| LOC110515683 | LOC105025469 | coding | upstream | 302033 | 5043780 ~ 5086440 (-) |
| LOC110515681 | agrp1 | coding | upstream | 401984 | 5143731 ~ 5147310 (-) |
| LOC118944412 | LOC100135822 | coding | upstream | 507532 | 5249279 ~ 5301650 (-) |
| usp8 | LOC106592072 | coding | upstream | 920829 | 5662576 ~ 5697259 (-) |
| LOC110526851 | vps13c | non-coding | downstream | 4854 | 4718652 ~ 4972108 (-) |
| G1991598 | NA | non-coding | downstream | 19018 | 4720588 ~ 4720898 (-) |
| G1991594 | NA | non-coding | downstream | 23052 | 4715901 ~ 4716864 (-) |
| G1991491 | NA | non-coding | downstream | 26996 | 4712630 ~ 4712920 (-) |
| G1991489 | NA | non-coding | downstream | 28222 | 4710244 ~ 4711694 (-) |
| G1991606 | NA | non-coding | upstream | 26334 | 4768081 ~ 4768299 (-) |
| G1991612 | NA | non-coding | upstream | 54101 | 4795848 ~ 4796133 (-) |
| G1991613 | NA | non-coding | upstream | 54848 | 4796595 ~ 4796963 (-) |
| G1991617 | NA | non-coding | upstream | 61613 | 4803360 ~ 4805143 (-) |
| G1991618 | NA | non-coding | upstream | 66046 | 4807793 ~ 4808601 (-) |
| G1991436 | NA | other | downstream | 152046 | 4586727 ~ 4587870 (-) |
| G1991382 | NA | other | downstream | 265652 | 4473753 ~ 4474264 (-) |
| G1991381 | NA | other | downstream | 266299 | 4473282 ~ 4473617 (-) |
| G1991846 | NA | other | upstream | 515975 | 5257722 ~ 5259782 (-) |
| G1992375 | NA | other | upstream | 966521 | 5708268 ~ 5708684 (-) |
| G1992485 | NA | other | upstream | 1244684 | 5986431 ~ 5988773 (-) |
