usp8 (LOC106592072)


Basic Information

Item Value
gene id usp8
gene name LOC106592072
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048590.1
NCBI id CM023244.2
chromosome length 51113553
location 5662576 ~ 5697259 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036964485.1
tattcttCAAATGTGATTAtaaacctaaccgtaaccacACTGCGAACCATacgcctaaacctaacccaaaatTAAGCCCCCAAAACACATTtcttttaaaaaatacaattttacgACATAGCCAAtatttactttgtggctgtggtaactatcGGAAAACACTAGAAAAAACTGAACAAGACAACAGTGCAACGTTATGAGCGGTGAGGACTGGAATATGTGAACATTGTACACTGTTGGTGATATATAACCCACCGTTGAAGATGCCTGCGGTGTCCCGCGGGGCGAAGGACTTGTATCTCTCTACTAACCTGGGGGACCTCAACAAGAAAGCTGAAGTCAAGCCTGACAAAATCAACACCAGGAGCTATGTCCAGAGTGCCTGTAAGATCTTCAAGGCTGCGGAGGAGTGTCGTCTGGATGGAGACGAGGAGAAGGCCTATGTTCTCTACATGAAATACCTGACGGTTTATGATCTCATCAAGAAGAGGCCCGATTTCAAGCAGCAACAGGAGTTCTTCCTGTCCGTGCTGGGGCCCACCAGCTTTAAAAAAGCCATAGAAGAAGCCGAGAAACTCTCTGAAAGCCTTAAACTCAGgtacgAGGAAGTCGAGGTTCGTAAAACGCtcgaggagaaagagagacaagaggagaagaaaaggagggaggataagacggagaaagatggagggagggcatCTCCAAAAGCAGGGAAAGAGATCAAGAAGGTAAAAGAGCAGAAGGAGATGAAAAATGTAACTTCAAAAGctGCGGTGTCAGCGGGAGGGATCACAGCAGAGGGGTTGTTCAAGATGATGAGGGACCAGGCCATTACGGTCATTGTGATGGACGCTCGCTGCCTCCGAGACTTCCAGGACTCACAGATCCAGGTCCCCACCCAGACTGTCATCAGTGTCCCAGAGGAGGCTATCAACCCTGGCATCACAGTGAACCAGATTGAGGCCAATCTACCCGATGCGTCCAGAGAGACGTGGAAGAGGCGGGGGTTCGTAGATTACATCATCCTACTGGACTGGTTCAGCTCTGTTACTGACCTCAAACTGGGAAGCACCTTACAAAGCCTCAAAGATGCTCTCTACAAGTGGGACAGTACCACTATCCTGCGTAGTGAGCCCATGGTTCTGGAGGGAGGCTATGAGAGCTGGCTCCTCTTCTACCCCATGTACACATCCAACGCCAAAGTCAGACCGCCCCGAACCCACTGCTACAGCACCCTCCCACAGCTGAACTTCAGCTACCCGTCACTGGAGGAGCCCAAACCTCCAACCCCTCCTCCCCCCGAGCCGGACCCTGAACCCCAGGCTCCCCCTGCCTCCCTGGGTAGCGTACAGGTGAACGGTGGCCCCCTGGAGGATCTGACCCCCTCCCACCCTCAGACCCCCTCCACATGGATGGAGGCTGACGCCACAGACTCACCCCACACAGGGTTCACTCACCCTGGAGTAGACCACAGCAAGAAGGACCCTGGAGCTGGTCCAGGGACCCCCAGCCAGCCTGGAGGGACAGCCAAGCACATCCCACAGATCGACCGTACCAAGAAGCCATCAGTCAGAGTCTCAGACGGGTCTAAAACCCCCCTGGATGCCCTCCCCAGGGACCTGCCCCCCTCCTCCCAGAATGGCCCGTCTGTACCCCAACCCAACCGCTCGGTCAAACCGGCCTTTGACCCGGCGGTGCCGCTGACGGACGAGGAACGAGGTCAGATCCACACAGAGACGGCTGCTCTGATGGAGAAGGCCCGGAGAGAGCAGGAACAACGCAAACAGGAACGCCGCAccgaggaggagtggagagagagggaacgccGGGAGAAGGAaaatgaggagatggagaggaggaaagaggaagagaacgGGACTCAGGAGAGGAAGAGATTGGAGAGACACaaggcagaggaggagaaggagaacggGGTTAGGgaagagcgagagaagagggaggataCGCCGACCAACGGTGATTCTCTGGACTCGCCGGCTCCCAACCGTATCGTCACGGAGATTAAGCGGGAGCTCCTAACCAGAGCCAGAAgtgaagagatggggaggagtGTACCAGGCCTGCCTGTTGGCTGGATGAAGtTCTTGGATACGGTAACCGGTACCTACCGTTACTACCATTCCCCAACCAACCGGGTGCACCGCTATCCCCCTGAGGTCAGCGTGCCCCAGAcgcccccctccacccctcctacGGCCAAACAGAAGCAGCCTCGCCCCGCTGAGCCAGACCAGACCATGGACCGTGACCAGGAGCAGTCCAAACTGAAACGTTCCTATTCTTCTCCAGACATCAGCCAGGACCTGAGGGAGGAGGGGCTAAAGAAGGTTACCGCCCCTATAACTGCAGCCACGCGCCCAACCTTTAACAGGGAGACCAAACCGTCCACTGCTAGCGTCTACACCAAGGTGGAGATCGCCCGTCCGTCTGCGGCTAAGATACGCAACCTGAACCCTGTGTTCGGCGGTCTGGGCGCCTCGCTCACCGGCCTGCGGAACCTCGGGAACACCTGCTACATGAACTCCATCCTGCAGTGTCTCTGCAACACCCCGGCCATGGTCGACTACTTCAACAAGAACCTCTATCAGGAGGATATCAACAGGGCAAATATCCTGGGTCACCGAGGCGAGGTGGCAGAGGAGTTTGGTGTGATCATGAAGGCTCTGTGGTCAGGCCTGTATAAGTGTATCAGCCCCCGCGACTTTAAGGTCACTATAGGGAAGATCAATGAATCCTTCTCTGGCCAGGAACAACAGGACTCCCAGGAGCTGCTGCTCTTCCTTATGGACGGACTCCACGAGGACCTCAACAAGgCTGCTAACCGTAAGGGTTACATAGAGGAGGAGAATGACGATCTGGACGACCAGCGGGCTGCTAACCAGGCCTGGACCAAACACAAGCTGCTCAACGAGTCTGTCATCGTAGCGCTGTTCCAGGGTCAGTTTAAGAGCACAGTTCAGTGTCTCACCTGCCACAGGAAGTCCCGCACCTTCGAGACCTTTATGTACCTGACCCTGCCGCTGGCCTCCACCAACAAGTGTTCCCTGCAGGACTGTCTGAAGCTGTTTTCTAAGGAGGAGAAGATGACCGACCAGAACAAGGTGTTCTGTCGACACTGTAAAGCTCTCAGAGACTCCGTCAAGAAACTGGAGATCTGGAAGGTCCCGCCCATCATACTGGTTCACCTTAAACGGTTCTCGTACGAGGGCCGTTGGAAACAGAAGCTGCAGACGACAGTAGACTTCCCTCTGGAGAACCTGGAcctcagtcagtatgtcatcggACCCAGACTCGGCCTCAAGAGATACAACCTGTTTGGAGTGTCTAACCATTATGGCGGTCTGGATGGGGGTCACTACACAGCCTACTGTAAGAACGCCATGAAACAGCGCTGGTACAAGTTTGACGACCACGAGGTCTCCGAAATCTCCACCTCCACCGTCAAGTCCTCCGCAGCGTacatcttcttcttctcctctctgtgaGGGCAGAGCTGCAACACTGCTAGGAGCTATGAGGCTACATAAAGGCTACATAAAGGCTAGCTAACATGCAAGCTGCTTTGACTCAGCTTCCTCTGCTGGTGGGAGAAAGGAACTGAACTGGCGATGTTTTTGTTAACTGAACTGAACTGCCAGGGGCCATACTTGTGAACTTTTGCTTAGAGCATGGTTTAAACCATTAGTCTAAAATGGCTGCTAGCTGTTTCTCTCTGGCCAAATTAGCCACAACGCTAATTAGCCACCACGCTGAGGAAGGCCAGCTAAGTAGATGATTATATCCGAATAAACAAATCAACCTATCAGATAACTTAGAGCCACCATCCACCATCACATTTGTTCATTAGGTAAATTTGCTTCCAACTGATTGGTTTAATTTGTTACCCATGGTCTAAGTGGAGTTTCCCCAATATATTGTTTTGCATGATGCTTCCTTGACTAGGCAAGTGGCATCATAGAAAAATGACGGTTTTCGCATAtatgatgaagttctgtgttgttTCTTATCCATTTAACATCCATGTACTTTCCAAATTACAAACGTAGGAGGATTATATTATAACATGTTTGTTATTCATACATTGTGAAAGTGATTTATTTTTAAGGAGGAAAATCATGGTCTAAGCAGAAGTTCACAAGTATGGCCATGCAAGGTTTGTAGGTTTTGGATAACTGAACTGGCTAGGTTTGGTGGTTTTGGTAGACTGAACTGACAGGTTGAAATGTGGATGTGTGGAAAGACAGGGACACACTGTAGAGTGTGGTGGAAGGGTGGGTTAGTGACTGGGTGTGTGCAGGAAAGGGAGAGACGCAGGCACTCCGATGCTTCAACTCATAGAGGACTCAACAGCTGTTAAAACACAACGTCTATTCATATTAAaccagagagcagggagagggttCCCTGTTAAAACACAACGTCTATTCATATTAAaccagagagcagggagagggatCCCTGTTAAAACACAACGTCTATTCATATTAAActagagagcagggagagggttCCCTGTTAAAACACAACGTCTATTCATATTAAaccagagagcagggagagggatCCCTGTTAAAACACAACGTCTATTCATATTAAaccagagagcagggagagggttCCCTGTTAACACACAACGTCTATTCATATTAAaccagagagcagggagagggttCCCTGTTAAAACACAACGTCTATTCATATTAAaccagagagcagggagagggatCCCTGTTAAAACACAACGTCTATTCATATTAAActagagagcagggagagggatCCCTGTTAAAACACAACGTCTATTCATATTAAaccagagagcagggagagggttCCCTGTT
>XM_036964484.1
atattcttCAAATGTGATTAtaaacctaaccgtaaccacACTGCGAACCATacgcctaaacctaacccaaaatTAAGCCCCCAAAACACATTtcttttaaaaaatacaattttacgACATAGCCAAtatttactttgtggctgtggtaactatcGGAAAACACTAGAAAAAACTGAACAAGACAACAGTGCAACGTTATGAGCGGTGAGGACTGGAATATGTGAACATTGTACACTGTTGGTGATATATAACCCACCGTTGAAGATGCCTGCGGTGTCCCGCGGGGCGAAGGACTTGTATCTCTCTACTAACCTGGGGGACCTCAACAAGAAAGCTGAAGTCAAGCCTGACAAAATCAACACCAGGAGCTATGTCCAGAGTGCCTGTAAGATCTTCAAGGCTGCGGAGGAGTGTCGTCTGGATGGAGACGAGGAGAAGGCCTATGTTCTCTACATGAAATACCTGACGGTTTATGATCTCATCAAGAAGAGGCCCGATTTCAAGCAGCAACAGGAGTTCTTCCTGTCCGTGCTGGGGCCCACCAGCTTTAAAAAAGCCATAGAAGAAGCCGAGAAACTCTCTGAAAGCCTTAAACTCAGgtacgAGGAAGTCGAGGTTCGTAAAACGCtcgaggagaaagagagacaagaggagaagaaaaggagggaggataagacggagaaagatggagggagggcatCTCCAAAAGCAGGGAAAGAGATCAAGAAGGTAAAAGAGCAGAAGGAGATGAAAAATGTAACTTCAAAAGctGCGGTGTCAGCGGGAGGGATCACAGCAGAGGGGTTGTTCAAGATGATGAGGGACCAGGCCATTACGGTCATTGTGATGGACGCTCGCTGCCTCCGAGACTTCCAGGACTCACAGATCCAGGTCCCCACCCAGACTGTCATCAGTGTCCCAGAGGAGGCTATCAACCCTGGCATCACAGTGAACCAGATTGAGGCCAATCTACCCGATGCGTCCAGAGAGACGTGGAAGAGGCGGGGGTTCGTAGATTACATCATCCTACTGGACTGGTTCAGCTCTGTTACTGACCTCAAACTGGGAAGCACCTTACAAAGCCTCAAAGATGCTCTCTACAAGTGGGACAGTACCACTATCCTGCGTAGTGAGCCCATGGTTCTGGAGGGAGGCTATGAGAGCTGGCTCCTCTTCTACCCCATGTACACATCCAACGCCAAAGTCAGACCGCCCCGAACCCACTGCTACAGCACCCTCCCACAGCTGAACTTCAGCTACCCGTCACTGGAGGAGCCCAAACCTCCAACCCCTCCTCCCCCCGAGCCGGACCCTGAACCCCAGGCTCCCCCTGCCTCCCTGGGTAGCGTACAGGTGAACGGTGGCCCCCTGGAGGATCTGACCCCCTCCCACCCTCAGACCCCCTCCACATGGATGGAGGCTGACGCCACAGACTCACCCCACACAGGGTTCACTCACCCTGGAGTAGACCACAGCAAGAAGGACCCTGGAGCTGGTCCAGGGACCCCCAGCCAGCCTGGAGGGACAGCCAAGCACATCCCACAGATCGACCGTACCAAGAAGCCATCAGTCAGAGTCTCAGACGGGTCTAAAACCCCCCTGGATGCCCTCCCCAGGGACCTGCCCCCCTCCTCCCAGAATGGCCCGTCTGTACCCCAACCCAACCGCTCGGTCAAACCGGCCTTTGACCCGGCGGTGCCGCTGACGGACGAGGAACGAGGTCAGATCCACACAGAGACGGCTGCTCTGATGGAGAAGGCCCGGAGAGAGCAGGAACAACGCAAACAGGAACGCCGCAccgaggaggagtggagagagagggaacgccGGGAGAAGGAaaatgaggagatggagaggaggaaagaggaagagaacgGGACTCAGGAGAGGAAGAGATTGGAGAGACACaaggcagaggaggagaaggagaacggGGTTAGGgaagagcgagagaagagggaggataCGCCGACCAACGGTGATTCTCTGGACTCGCCGGCTCCCAACCGTATCGTCACGGAGATTAAGGCTCCCTCCCCCCTGAAGCTTAGTGGTGATGTAAAGAGGAGTCGTCAGCCTGGGAGGTTACAGCATAGAACAGTTGAGGACTATGTCATACCCAAGCGGGAGCTCCTAACCAGAGCCAGAAgtgaagagatggggaggagtGTACCAGGCCTGCCTGTTGGCTGGATGAAGtTCTTGGATACGGTAACCGGTACCTACCGTTACTACCATTCCCCAACCAACCGGGTGCACCGCTATCCCCCTGAGGTCAGCGTGCCCCAGAcgcccccctccacccctcctacGGCCAAACAGAAGCAGCCTCGCCCCGCTGAGCCAGACCAGACCATGGACCGTGACCAGGAGCAGTCCAAACTGAAACGTTCCTATTCTTCTCCAGACATCAGCCAGGACCTGAGGGAGGAGGGGCTAAAGAAGGTTACCGCCCCTATAACTGCAGCCACGCGCCCAACCTTTAACAGGGAGACCAAACCGTCCACTGCTAGCGTCTACACCAAGGTGGAGATCGCCCGTCCGTCTGCGGCTAAGATACGCAACCTGAACCCTGTGTTCGGCGGTCTGGGCGCCTCGCTCACCGGCCTGCGGAACCTCGGGAACACCTGCTACATGAACTCCATCCTGCAGTGTCTCTGCAACACCCCGGCCATGGTCGACTACTTCAACAAGAACCTCTATCAGGAGGATATCAACAGGGCAAATATCCTGGGTCACCGAGGCGAGGTGGCAGAGGAGTTTGGTGTGATCATGAAGGCTCTGTGGTCAGGCCTGTATAAGTGTATCAGCCCCCGCGACTTTAAGGTCACTATAGGGAAGATCAATGAATCCTTCTCTGGCCAGGAACAACAGGACTCCCAGGAGCTGCTGCTCTTCCTTATGGACGGACTCCACGAGGACCTCAACAAGgCTGCTAACCGTAAGGGTTACATAGAGGAGGAGAATGACGATCTGGACGACCAGCGGGCTGCTAACCAGGCCTGGACCAAACACAAGCTGCTCAACGAGTCTGTCATCGTAGCGCTGTTCCAGGGTCAGTTTAAGAGCACAGTTCAGTGTCTCACCTGCCACAGGAAGTCCCGCACCTTCGAGACCTTTATGTACCTGACCCTGCCGCTGGCCTCCACCAACAAGTGTTCCCTGCAGGACTGTCTGAAGCTGTTTTCTAAGGAGGAGAAGATGACCGACCAGAACAAGGTGTTCTGTCGACACTGTAAAGCTCTCAGAGACTCCGTCAAGAAACTGGAGATCTGGAAGGTCCCGCCCATCATACTGGTTCACCTTAAACGGTTCTCGTACGAGGGCCGTTGGAAACAGAAGCTGCAGACGACAGTAGACTTCCCTCTGGAGAACCTGGAcctcagtcagtatgtcatcggACCCAGACTCGGCCTCAAGAGATACAACCTGTTTGGAGTGTCTAACCATTATGGCGGTCTGGATGGGGGTCACTACACAGCCTACTGTAAGAACGCCATGAAACAGCGCTGGTACAAGTTTGACGACCACGAGGTCTCCGAAATCTCCACCTCCACCGTCAAGTCCTCCGCAGCGTacatcttcttcttctcctctctgtgaGGGCAGAGCTGCAACACTGCTAGGAGCTATGAGGCTACATAAAGGCTACATAAAGGCTAGCTAACATGCAAGCTGCTTTGACTCAGCTTCCTCTGCTGGTGGGAGAAAGGAACTGAACTGGCGATGTTTTTGTTAACTGAACTGAACTGCCAGGGGCCATACTTGTGAACTTTTGCTTAGAGCATGGTTTAAACCATTAGTCTAAAATGGCTGCTAGCTGTTTCTCTCTGGCCAAATTAGCCACAACGCTAATTAGCCACCACGCTGAGGAAGGCCAGCTAAGTAGATGATTATATCCGAATAAACAAATCAACCTATCAGATAACTTAGAGCCACCATCCACCATCACATTTGTTCATTAGGTAAATTTGCTTCCAACTGATTGGTTTAATTTGTTACCCATGGTCTAAGTGGAGTTTCCCCAATATATTGTTTTGCATGATGCTTCCTTGACTAGGCAAGTGGCATCATAGAAAAATGACGGTTTTCGCATAtatgatgaagttctgtgttgttTCTTATCCATTTAACATCCATGTACTTTCCAAATTACAAACGTAGGAGGATTATATTATAACATGTTTGTTATTCATACATTGTGAAAGTGATTTATTTTTAAGGAGGAAAATCATGGTCTAAGCAGAAGTTCACAAGTATGGCCATGCAAGGTTTGTAGGTTTTGGATAACTGAACTGGCTAGGTTTGGTGGTTTTGGTAGACTGAACTGACAGGTTGAAATGTGGATGTGTGGAAAGACAGGGACACACTGTAGAGTGTGGTGGAAGGGTGGGTTAGTGACTGGGTGTGTGCAGGAAAGGGAGAGACGCAGGCACTCCGATGCTTCAACTCATAGAGGACTCAACAGCTGTTAAAACACAACGTCTATTCATATTAAaccagagagcagggagagggttCCCTGTTAAAACACAACGTCTATTCATATTAAaccagagagcagggagagggatCCCTGTTAAAACACAACGTCTATTCATATTAAActagagagcagggagagggttCCCTGTTAAAACACAACGTCTATTCATATTAAaccagagagcagggagagggatCCCTGTTAAAACACAACGTCTATTCATATTAAaccagagagcagggagagggttCCCTGTTAACACACAACGTCTATTCATATTAAaccagagagcagggagagggttCCCTGTTAAAACACAACGTCTATTCATATTAAaccagagagcagggagagggatCCCTGTTAAAACACAACGTCTATTCATATTAAActagagagcagggagagggatCCCTGTTAAAACACAACGTCTATTCATATTAAaccagagagcagggagagggttCCCTGTT

Function

NR:

description
PREDICTED: ubiquitin carboxyl-terminal hydrolase 8-like

GO: NA

KEGG:

id description
K11839 USP8, UBP5; ubiquitin carboxyl-terminal hydrolase 8

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036964485.1 False 4862 mRNA 0.51 19 5662576 5697258
XM_036964484.1 True 4959 mRNA 0.51 20 5662576 5697259

Neighbor

gene id symbol gene type direction distance location
LOC118944412 LOC100135822 coding downstream 360926 5249279 ~ 5301650 (-)
LOC110515681 agrp1 coding downstream 515266 5143731 ~ 5147310 (-)
LOC110515683 LOC105025469 coding downstream 576136 5043780 ~ 5086440 (-)
LOC110525056 LOC106592677 coding downstream 687286 4973789 ~ 4975290 (-)
LOC110526851 vps13c coding downstream 690468 4718652 ~ 4972108 (-)
LOC110514656 LOC106593544 coding upstream 52267 5749526 ~ 5761005 (-)
LOC110514841 LOC106593544 coding upstream 79763 5777022 ~ 5793342 (-)
LOC110519162 s27a2 coding upstream 97829 5795088 ~ 5816747 (-)
LOC110517106 fsd2 coding upstream 352095 6049354 ~ 6099236 (-)
LOC118944399 LOC106562864 coding upstream 448289 6145548 ~ 6298226 (-)
G1992329 NA non-coding downstream 648 5660547 ~ 5661928 (-)
G1992330 NA non-coding downstream 4164 5657584 ~ 5658412 (-)
G1992351 NA non-coding downstream 11384 5635723 ~ 5651192 (-)
G1992345 NA non-coding downstream 34809 5627077 ~ 5627767 (-)
G1992343 NA non-coding downstream 37437 5624522 ~ 5625139 (-)
G1992370 NA non-coding upstream 1897 5699156 ~ 5699870 (-)
G1992374 NA non-coding upstream 10509 5707768 ~ 5708019 (-)
G1992376 NA non-coding upstream 11944 5709203 ~ 5709665 (-)
G1992379 NA non-coding upstream 18380 5715639 ~ 5715992 (-)
G1992380 NA non-coding upstream 20209 5717468 ~ 5717687 (-)
G1991846 NA other downstream 402794 5257722 ~ 5259782 (-)
G1991436 NA other downstream 1074706 4586727 ~ 4587870 (-)
G1991382 NA other downstream 1188312 4473753 ~ 4474264 (-)
G1992375 NA other upstream 11009 5708268 ~ 5708684 (-)
G1992485 NA other upstream 289172 5986431 ~ 5988773 (-)
LOC118936596 LOC106591161 other upstream 699785 6391414 ~ 6444276 (-)
G1994075 NA other upstream 1691986 7389245 ~ 7389568 (-)
LOC118936603 LOC106587968 other upstream 1954127 7647283 ~ 7665132 (-)

Expression


Co-expression Network