Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC110526845 |
| gene name | LOC106592787 |
| gene type | misc |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048590.1 |
| NCBI id | CM023244.2 |
| chromosome length | 51113553 |
| location | 7744309 ~ 7751407 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| NAD-dependent protein deacetylase sirtuin-3-like |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XM_036963563.1 | False | 1803 | mRNA | 0.48 | 7 | 7744352 | 7751407 |
| TU2282284 | False | 748 | lncRNA | 0.45 | 2 | 7744309 | 7748848 |
| TU2282285 | False | 707 | lncRNA | 0.46 | 2 | 7744350 | 7748848 |
| TU2282286 | False | 437 | lncRNA | 0.52 | 2 | 7744620 | 7748848 |
| TU2282281 | False | 934 | TUCP | 0.49 | 5 | 7749295 | 7751377 |
| TU2282282 | True | 896 | TUCP | 0.49 | 4 | 7749547 | 7751377 |
7,737,000
7,738,000
7,739,000
7,740,000
7,741,000
7,742,000
7,743,000
7,744,000
7,745,000
7,746,000
7,747,000
7,748,000
7,749,000
7,750,000
7,751,000
7,752,000
7,753,000
7,754,000
7,755,000
NC_048590.1
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118936603 | LOC106587968 | coding | downstream | 79869 | 7647283 ~ 7665132 (-) |
| LOC118944548 | NA | coding | downstream | 141921 | 7597154 ~ 7602431 (-) |
| LOC110526837 | LOC106592039 | coding | downstream | 147440 | 7579397 ~ 7596912 (-) |
| LOC110526838 | LOC106587956 | coding | downstream | 172196 | 7566616 ~ 7572156 (-) |
| LOC110526835 | LOC105026486 | coding | downstream | 179508 | 7558011 ~ 7564844 (-) |
| LOC118944558 | LOC106595801 | coding | upstream | 51236 | 7802643 ~ 7809933 (-) |
| LOC110515105 | LOC106593850 | coding | upstream | 112049 | 7863456 ~ 7873075 (-) |
| LOC118944444 | LOC106587932 | coding | upstream | 128855 | 7880262 ~ 7881911 (-) |
| LOC110514892 | NA | coding | upstream | 149688 | 7900918 ~ 7901646 (-) |
| LOC118944417 | LOC106587940 | coding | upstream | 175195 | 7926602 ~ 7937829 (-) |
| G1994196 | NA | non-coding | downstream | 11909 | 7732143 ~ 7732443 (-) |
| G1994184 | NA | non-coding | downstream | 29537 | 7714349 ~ 7714815 (-) |
| G1994174 | NA | non-coding | downstream | 63424 | 7673631 ~ 7680928 (-) |
| G1994101 | NA | non-coding | downstream | 98329 | 7553080 ~ 7646023 (-) |
| G1994202 | LOC106587886 | non-coding | upstream | 256 | 7751663 ~ 7760585 (-) |
| G1994209 | NA | non-coding | upstream | 9487 | 7760894 ~ 7761162 (-) |
| G1994210 | NA | non-coding | upstream | 10169 | 7761576 ~ 7761920 (-) |
| G1994213 | NA | non-coding | upstream | 12046 | 7763453 ~ 7763832 (-) |
| G1994215 | NA | non-coding | upstream | 13536 | 7764943 ~ 7765194 (-) |
| G1994075 | NA | other | downstream | 354784 | 7389245 ~ 7389568 (-) |
| LOC118936596 | LOC106591161 | other | downstream | 1300123 | 6391414 ~ 6444276 (-) |
| G1992485 | NA | other | downstream | 1755579 | 5986431 ~ 5988773 (-) |
| G1992375 | NA | other | downstream | 2035668 | 5708268 ~ 5708684 (-) |
| LOC118944463 | LOC106562776 | other | upstream | 348913 | 8096974 ~ 8105982 (-) |
| LOC110527031 | LOC106587988 | other | upstream | 938637 | 8564300 ~ 8805872 (-) |
| LOC110516734 | LOC107593117 | other | upstream | 1341673 | 9090166 ~ 9108249 (-) |
| LOC110526845 | LOC106592787 | other | upstream | 447 | 7744309 ~ 7751407 (-) |
