Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC110518910 |
| gene name | LOC106587992 |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048590.1 |
| NCBI id | CM023244.2 |
| chromosome length | 51113553 |
| location | 8071029 ~ 8089570 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| beta-1,3-galactosyltransferase 1-like |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XM_036964048.1 | False | 2582 | mRNA | 0.48 | 2 | 8071029 | 8075936 |
| XM_036964049.1 | False | 1967 | mRNA | 0.50 | 2 | 8071029 | 8089566 |
| XM_036964047.1 | True | 2019 | mRNA | 0.49 | 2 | 8085079 | 8089570 |
8,070,000
8,072,000
8,074,000
8,076,000
8,078,000
8,080,000
8,082,000
8,084,000
8,086,000
8,088,000
8,090,000
8,092,000
8,094,000
8,096,000
8,098,000
8,100,000
8,102,000
8,104,000
8,106,000
8,108,000
8,110,000
NC_048590.1
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110519426 | LOC106587985 | coding | downstream | 106010 | 7943252 ~ 7965019 (-) |
| LOC118944417 | LOC106587940 | coding | downstream | 133200 | 7926602 ~ 7937829 (-) |
| LOC118944418 | NA | coding | downstream | 140928 | 7928632 ~ 7930101 (-) |
| LOC110514892 | NA | coding | downstream | 169383 | 7900918 ~ 7901646 (-) |
| LOC118944444 | LOC106587932 | coding | downstream | 189118 | 7880262 ~ 7881911 (-) |
| LOC118944463 | LOC106562776 | coding | upstream | 7404 | 8096974 ~ 8105982 (-) |
| LOC118944505 | LOC105029587 | coding | upstream | 39758 | 8129328 ~ 8143363 (-) |
| LOC110527031 | LOC106587988 | coding | upstream | 474730 | 8564300 ~ 8805872 (-) |
| LOC118944554 | NA | coding | upstream | 482159 | 8571729 ~ 8573559 (-) |
| LOC118944553 | NA | coding | upstream | 485645 | 8575215 ~ 8578501 (-) |
| G1994322 | NA | non-coding | downstream | 8519 | 8062027 ~ 8062510 (-) |
| G1994319 | NA | non-coding | downstream | 10892 | 8058487 ~ 8060137 (-) |
| G1994320 | NA | non-coding | downstream | 10991 | 8059158 ~ 8060038 (-) |
| G1994302 | LOC106594039 | non-coding | downstream | 32940 | 8008778 ~ 8038089 (-) |
| G1994312 | NA | non-coding | downstream | 40720 | 8028400 ~ 8030309 (-) |
| G1994334 | NA | non-coding | upstream | 29642 | 8119212 ~ 8120344 (-) |
| G1994341 | NA | non-coding | upstream | 55469 | 8145039 ~ 8148488 (-) |
| G1994355 | NA | non-coding | upstream | 77155 | 8166725 ~ 8167145 (-) |
| G1994359 | NA | non-coding | upstream | 98964 | 8188534 ~ 8189659 (-) |
| G1994394 | NA | non-coding | upstream | 162901 | 8252471 ~ 8253925 (-) |
| LOC110515105 | LOC106593850 | other | downstream | 198013 | 7863456 ~ 7873075 (-) |
| LOC118944558 | LOC106595801 | other | downstream | 265175 | 7802643 ~ 7809933 (-) |
| LOC110526845 | LOC106592787 | other | downstream | 319652 | 7744309 ~ 7751407 (-) |
| LOC118936603 | LOC106587968 | other | downstream | 405897 | 7647283 ~ 7665132 (-) |
| G1994075 | NA | other | downstream | 681461 | 7389245 ~ 7389568 (-) |
| LOC110516734 | LOC107593117 | other | upstream | 1003510 | 9090166 ~ 9108249 (-) |
| G1994674 | NA | other | upstream | 1087468 | 9177038 ~ 9180705 (-) |
| G1994786 | NA | other | upstream | 1358023 | 9447593 ~ 9448494 (-) |
