LOC118944485


Basic Information

Item Value
gene id LOC118944485
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048590.1
NCBI id CM023244.2
chromosome length 51113553
location 8079456 ~ 8080950 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XR_005039823.1
ccagcacctcccctaaccaggtgttctactctgctagccagcacctcccctaaccaggtgttctaatctgctagccagcacctcccctaaccaggtgttctactccgctagcccagTACCTCCTCTAGCCAGGtcttctactccgctagcccagtacctcccctaaccaggtctACTCCGCTAGCCCAGTACCTCccttaaacaggtgttctactctgctagccagcacctcccctaaccaggtgttctactccgctagcccagtacctccactaaccaggtcttctactccgctagccagcacctcccctaaccaggtcttctactccgctagcccagTACCTCCCTTAAACAGgtgtgtgtttctctTTCGCCTCCAGATACAATTGTTAATAGAATCATTGGAGGGCTCACAGTATATCATTTACCTCGATAGGATTtaagatggacaacactgggagaGCAAGTTACAACAGGACAGCAGATTGAACCACTAAAATAGACTGAAGTAATGATTTACTATGACGTATCCATAACGCATTCATCACACTATAAACATTTAATGAGCGGATTGTAACCAGTGGCAACCGCATTGTTAAAGGTCAATGAAATATATTTATATCTTATCTAATAGCGTAACCATGTCATGATTTGCAATCGCTTTAGATATCTTAATAAATGCGGTATTACAATGACAGCGCAGTGTGAACATCAATGTCATACTTACTGAGACACCTAGTGGAGACATAACAGCATGACTAAGGAGTTCATTcacttacacacagacacacagcttgaCTCGGGAGCGCTGTAACGGCACATTTTGGGGGGGATTGGGTACTGGCTCCTCTTCCTCTATAAAACATAGACAGAACAGTAATGAAGACAGGCAGACACTGCTTCCCCAATAGAAATACTCAGTCCCACTTGTCGTGGCGACTTCGGCTAGCTCAGCTCATGCATAGAAACACGTCTTCGGGTCAAATGGTCGTGTCGCGCCGAACTGCGATTGTGCAGACCGTCACACCAGAGGTACTCCTTCGATATCAAGTTGTTCTGGACGAAAACGTGTCAGATGGTCACTTTCACAAGGTTGGAGTAACAAAATGTTCAACTACTGAagacacctgttcattgaaatgcattccaggttgactacctcatgaagctggttgagagaatgccaagcgtctgcaaagccgtcatcaaatcaaatcgaagggtggctactttgaagaatatcaaacataaaatatattttgatttgtttaacactttttgttggttactacatgattccatattgtgttatttcatagttttgacgtcttcactctcattctacactgtagaaaataacacaaataaaaaccctggaatga

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005039823.1 True 1382 mRNA 0.45 2 8079456 8080950

Neighbor

gene id symbol gene type direction distance location
LOC110519426 LOC106587985 coding downstream 114437 7943252 ~ 7965019 (-)
LOC118944417 LOC106587940 coding downstream 141627 7926602 ~ 7937829 (-)
LOC118944418 NA coding downstream 149355 7928632 ~ 7930101 (-)
LOC110514892 NA coding downstream 177810 7900918 ~ 7901646 (-)
LOC118944444 LOC106587932 coding downstream 197545 7880262 ~ 7881911 (-)
LOC118944463 LOC106562776 coding upstream 16024 8096974 ~ 8105982 (-)
LOC118944505 LOC105029587 coding upstream 48378 8129328 ~ 8143363 (-)
LOC110527031 LOC106587988 coding upstream 483350 8564300 ~ 8805872 (-)
LOC118944554 NA coding upstream 490779 8571729 ~ 8573559 (-)
LOC118944553 NA coding upstream 494265 8575215 ~ 8578501 (-)
G1994322 NA non-coding downstream 16946 8062027 ~ 8062510 (-)
G1994319 NA non-coding downstream 19319 8058487 ~ 8060137 (-)
G1994320 NA non-coding downstream 19418 8059158 ~ 8060038 (-)
G1994312 NA non-coding downstream 49147 8028400 ~ 8030309 (-)
G1994306 NA non-coding downstream 65002 8014079 ~ 8014454 (-)
G1994334 NA non-coding upstream 38262 8119212 ~ 8120344 (-)
G1994341 NA non-coding upstream 64089 8145039 ~ 8148488 (-)
G1994355 NA non-coding upstream 85775 8166725 ~ 8167145 (-)
G1994359 NA non-coding upstream 107584 8188534 ~ 8189659 (-)
G1994394 NA non-coding upstream 171521 8252471 ~ 8253925 (-)
LOC110515105 LOC106593850 other downstream 206440 7863456 ~ 7873075 (-)
LOC118944558 LOC106595801 other downstream 273602 7802643 ~ 7809933 (-)
LOC110526845 LOC106592787 other downstream 328079 7744309 ~ 7751407 (-)
LOC118936603 LOC106587968 other downstream 414324 7647283 ~ 7665132 (-)
G1994075 NA other downstream 689888 7389245 ~ 7389568 (-)
LOC110516734 LOC107593117 other upstream 1012130 9090166 ~ 9108249 (-)
G1994674 NA other upstream 1096088 9177038 ~ 9180705 (-)
G1994786 NA other upstream 1366643 9447593 ~ 9448494 (-)

Expression


Co-expression Network