LOC110506240


Basic Information

Item Value
gene id LOC110506240
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048590.1
NCBI id CM023244.2
chromosome length 51113553
location 9944809 ~ 9965961 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036964127.1
ctgattgagaaccatacttaggtagcctgttttcccacttttgtttgtgggtggttattttccgtttcagtgttttcaccataggggactgtttcggttttcctttATTCTCTTGTTCGTTTGTTTTCTGTGTTCAGTGTAATAAATATGacaaacacttaccacgctgcatattggtccaaTATTTCATACTCCTCctttacagaaccacccaccacaacggaccaagcagcgtggtaaccaggagcagagggttctggactcctggacttgggaggagattttggacgtgaAGAGCAGTGAATGGATAGACAGATACCACATGAAATTCCTGGGCTCGGTCCAAGTGCCCTACCACAAAGGCAATGATGTTCTGTGTGCAGCTATGCAGAAGAGTAACCAGTGCAGCCACTTCTTCCAGTTGAAGAATGTTTCCTTCTGTGGCTATCACCCTAAGAACAGCAAGTACTTTGGCTTCATCACAAAACACCCAGCTGACCAGAGATTTGCCTGTCATGTGTTTGTGTCTGAAGATTCTACTAAACCCCTGGCAGAGTCTGTTGGGAAAGCCTTCCAGTTGTACTATAAGGAATTTGTAGATTACTCCTGTCCAACAGTGGATATTTACCTGGAATAGCACCCGCCCCAACTTCCCCCACAACCCTGTACATTACAGATTATCATAACATAAAGTTGCATGACGGAGAAAACATTTCTAACAAATATTAACTAATATATCTGACaaaaatatggagagagagaaagaaggagaggtaTTGGTGTCTACTGTTTATCCAAATATGTCAAACAGTATGAAGATTGAACAAATAATTGATCCAAACATAGTGGAGACGTTGAAGAGAGGGTTGCAAAATATGCTAAATGGAGTCACTGATGAGGAAGTTAATGTGCCTATGGTGTCCTCAGGCTGTCCACTCAAAGCACAATGCTCAAATCATAGTGACCTGGACTGGAATAGTCTGAGACTAATCTTTGTCGACTTGAATCCCAGGTAAGAACACTGGTCTTTGTGGACTTGGAGCTTGAATCCCAGGTAGAACACTGAACTTTGTGGACTTGGAGCTTGAATCCCAGGTAGAACACTGAGCTTTGTGGACTTGGAGCTTGAATCCCAGGTAGAACACTGAGCTTTGTGGACTTGGTGAACCCCAGAAAAAACAGTAGTCACTAAGGTAACAGCAAATGGAGGTCagggaaaataaattaattaattaatgaacCTGCCAtaaagatcctattaaattactagtaTTTGAGTATTCTAATCCCTAATTCTTTGGAATCTCACATTTTGGTGTGATACATTGCGTGAGGGAAACTGATTCTGCATGAGCTAATTGTGCAGTGTGTTTGGAGAGGGTGATAAGGCCTCACTGGAGAGTCCTGTGGGCGAAGGTAACTAATGATCTAGGATCAAATTACCCTACCCCAACCTTTACAATTAAGGGGATGACAAATGATCTGCCAAATTATCAGTGGCTAACTGTTACTTATTTTCCATGTGGTTGCTCCCACTAAAACAAAAACAAGTAAGCATTAGGGTCACACTGTTGACCAGGAATGTGTCTTTAATATGCTGCAAAGCCTTTAATATGCTGCAAAGCCTTTGGTAGTATCTCTGGTACATTGTCAGAGCCTTCAAATATATTCACATTAAGGAATcaagcaaacatttaaaaaaaggagATTCCTACCAATAAAAGCGCTCACGTTG

Function

NR:

description
C-Jun-amino-terminal kinase-interacting protein 1 isoform X2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036964127.1 True 1735 mRNA 0.42 5 9944809 9965961

Neighbor

gene id symbol gene type direction distance location
LOC110506241 LOC106561900 coding upstream 26514 9845927 ~ 9918295 (+)
si:ch211-266g18.10 LOC106561896 coding upstream 132711 9707454 ~ 9812098 (+)
LOC110526863 LOC106562818 coding upstream 401536 9540286 ~ 9543273 (+)
klf13 LOC105021104 coding upstream 710806 9173028 ~ 9234003 (+)
LOC118936595 LOC106609700 coding upstream 929322 8982115 ~ 9015487 (+)
gnmt gnmt coding downstream 302990 10268951 ~ 10282107 (+)
daam2 daam2 coding downstream 1049038 11014999 ~ 11241714 (+)
spdya spdya coding downstream 2872327 12838288 ~ 12845477 (+)
wdr43 LOC106561875 coding downstream 2897028 12862989 ~ 12899263 (+)
LOC110515264 LOC106583873 coding downstream 3581970 13547931 ~ 13554393 (+)
G1995060 NA non-coding upstream 79661 9861566 ~ 9865148 (+)
G1994971 NA non-coding upstream 246366 9698120 ~ 9698443 (+)
G1994969 NA non-coding upstream 248805 9695799 ~ 9696004 (+)
G1994959 NA non-coding upstream 254350 9675977 ~ 9690459 (+)
G1994966 NA non-coding upstream 261257 9681586 ~ 9683552 (+)
G1995089 NA non-coding downstream 18286 9984247 ~ 9984523 (+)
G1995091 NA non-coding downstream 22141 9988102 ~ 9988795 (+)
G1995093 NA non-coding downstream 24121 9990082 ~ 9990647 (+)
G1995027 NA non-coding downstream 36701 10002662 ~ 10004515 (+)
G1995265 NA non-coding downstream 39572 10005533 ~ 10005770 (+)
G1994851 NA other upstream 378655 9560723 ~ 9566154 (+)
G1994757 LOC106613263 other upstream 553876 9390568 ~ 9390933 (+)
G1993783 NA other upstream 1246686 8697174 ~ 8698123 (+)
G1993771 herc1 other upstream 1276542 8666601 ~ 8668267 (+)
LOC110512379 LOC106587994 other upstream 1393442 8537913 ~ 8553492 (+)
G1998628 NA other downstream 3256076 13222037 ~ 13222681 (+)
G2002614 NA other downstream 5723807 15689768 ~ 15696280 (+)
LOC110506284 LOC106561914 other downstream 5829171 15734525 ~ 15800073 (+)
G2002823 NA other downstream 6106026 16071987 ~ 16074044 (+)
fshb LOC100136594 other downstream 6646524 16609650 ~ 16614319 (+)

Expression


Co-expression Network