Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC110506240 |
| gene name | NA |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048590.1 |
| NCBI id | CM023244.2 |
| chromosome length | 51113553 |
| location | 9944809 ~ 9965961 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| C-Jun-amino-terminal kinase-interacting protein 1 isoform X2 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XM_036964127.1 | True | 1735 | mRNA | 0.42 | 5 | 9944809 | 9965961 |
9,928,000
9,932,000
9,936,000
9,940,000
9,944,000
9,948,000
9,952,000
9,956,000
9,960,000
9,964,000
9,968,000
9,972,000
NC_048590.1
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110506241 | LOC106561900 | coding | upstream | 26514 | 9845927 ~ 9918295 (+) |
| si:ch211-266g18.10 | LOC106561896 | coding | upstream | 132711 | 9707454 ~ 9812098 (+) |
| LOC110526863 | LOC106562818 | coding | upstream | 401536 | 9540286 ~ 9543273 (+) |
| klf13 | LOC105021104 | coding | upstream | 710806 | 9173028 ~ 9234003 (+) |
| LOC118936595 | LOC106609700 | coding | upstream | 929322 | 8982115 ~ 9015487 (+) |
| gnmt | gnmt | coding | downstream | 302990 | 10268951 ~ 10282107 (+) |
| daam2 | daam2 | coding | downstream | 1049038 | 11014999 ~ 11241714 (+) |
| spdya | spdya | coding | downstream | 2872327 | 12838288 ~ 12845477 (+) |
| wdr43 | LOC106561875 | coding | downstream | 2897028 | 12862989 ~ 12899263 (+) |
| LOC110515264 | LOC106583873 | coding | downstream | 3581970 | 13547931 ~ 13554393 (+) |
| G1995060 | NA | non-coding | upstream | 79661 | 9861566 ~ 9865148 (+) |
| G1994971 | NA | non-coding | upstream | 246366 | 9698120 ~ 9698443 (+) |
| G1994969 | NA | non-coding | upstream | 248805 | 9695799 ~ 9696004 (+) |
| G1994959 | NA | non-coding | upstream | 254350 | 9675977 ~ 9690459 (+) |
| G1994966 | NA | non-coding | upstream | 261257 | 9681586 ~ 9683552 (+) |
| G1995089 | NA | non-coding | downstream | 18286 | 9984247 ~ 9984523 (+) |
| G1995091 | NA | non-coding | downstream | 22141 | 9988102 ~ 9988795 (+) |
| G1995093 | NA | non-coding | downstream | 24121 | 9990082 ~ 9990647 (+) |
| G1995027 | NA | non-coding | downstream | 36701 | 10002662 ~ 10004515 (+) |
| G1995265 | NA | non-coding | downstream | 39572 | 10005533 ~ 10005770 (+) |
| G1994851 | NA | other | upstream | 378655 | 9560723 ~ 9566154 (+) |
| G1994757 | LOC106613263 | other | upstream | 553876 | 9390568 ~ 9390933 (+) |
| G1993783 | NA | other | upstream | 1246686 | 8697174 ~ 8698123 (+) |
| G1993771 | herc1 | other | upstream | 1276542 | 8666601 ~ 8668267 (+) |
| LOC110512379 | LOC106587994 | other | upstream | 1393442 | 8537913 ~ 8553492 (+) |
| G1998628 | NA | other | downstream | 3256076 | 13222037 ~ 13222681 (+) |
| G2002614 | NA | other | downstream | 5723807 | 15689768 ~ 15696280 (+) |
| LOC110506284 | LOC106561914 | other | downstream | 5829171 | 15734525 ~ 15800073 (+) |
| G2002823 | NA | other | downstream | 6106026 | 16071987 ~ 16074044 (+) |
| fshb | LOC100136594 | other | downstream | 6646524 | 16609650 ~ 16614319 (+) |
