kcnk17 (LOC106562019)


Basic Information

Item Value
gene id kcnk17
gene name LOC106562019
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048590.1
NCBI id CM023244.2
chromosome length 51113553
location 10693574 ~ 10733938 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021585498.1
ATGGCTTGTCTCAGTGGGTTCAGCCTGTCTCGCATCCCCTCTATCCTGATGTTGGCGGTACTGTACGTGGCCTATGTGTTGATCGGAGGACTGATCTTCTGGAAGCTGGAAGGAGGTCTGGTGCGGCAGGAAAAAACCCGTATACTTGAGGAGAAGAGATCACTACTAGACACATACCCCTGTCTGAACCAAGAGGCCCTGGATACTATAGCTCAGGTATTTCGAGATTCTTCCAAGGTTGGGCTTAGTCTGAAAGGGAACCAGACCATGGACAGCTTCTGGAAGTTCACTAGCTCTGCTGTGTTTGCTGCCACTGTTGTCACCACTATAGGCTATGGCAACATGAGCCCCAGTACAACGGCAGGTCAGATCTTCTGTGTGTTCTTTGCTCTGTTTGGGATCCCTCTGAACATGGTGGTGCTGAACAGAGTAGGCAAGTACATGCTGGCCATAGAGAGGAAAGCCTCCGATTTCATCCAGGGAAAGACCAATCACAGGAAGTTAACCAGGTTCATGATCCACCTGTTGTCCTACCTCTCTGGAACAGCACTCTTCTTTGTGATGCCCATGGTGGTGTTCAAACAGCAAGAGGGCTGGAGCTACTCACAGGCGATCTACTATTGCTTCATTTCACTCAGCACCATTGGCTTTGGAGACTACGTCGCAGACAGTAATCCCGACcagtactatccagagtggtacaGCATCCTCATGGCTTCCTGGATCTTCTTCGGGCTGGCCTGGTTGGCCCTAGTCATCAACCACACCAGCGACATCCTGGAGCGGCTCAACACCCACCTTAAACACTGGTGGAGCCCTGAGGAACCTAGCAACGCAGGACCGGTGGATGAGGTCAAGGAAACCCCGGTGGACGGTTAA

Function

NR:

description
potassium channel subfamily K member 17-like

GO: NA

KEGG:

id description
K04925 KCNK17, K2P17.1; potassium channel subfamily K member 17

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021585498.1 True 879 mRNA 0.52 5 10693574 10733938

Neighbor

gene id symbol gene type direction distance location
kcnk5a kcnk5 coding downstream 47692 10588470 ~ 10645882 (-)
zgc:85722 LOC106561887 coding downstream 146392 10455201 ~ 10547182 (-)
LOC110506249 NA coding downstream 240432 10451909 ~ 10453142 (-)
syt14a syt14 coding downstream 252783 10307297 ~ 10440791 (-)
manea LOC106561892 coding downstream 454908 10228344 ~ 10238666 (-)
LOC110506078 kif6 coding upstream 40108 10774046 ~ 10873761 (-)
kif6 kif6 coding upstream 148266 10882204 ~ 10986615 (-)
LOC118944586 NA coding upstream 314481 11048419 ~ 11048572 (-)
mocs1 LOC100196496 coding upstream 517897 11251835 ~ 11301417 (-)
LOC118944497 NA coding upstream 589230 11323168 ~ 11325682 (-)
G1996455 NA non-coding downstream 32788 10660313 ~ 10660786 (-)
G1996452 NA non-coding downstream 38624 10654717 ~ 10654950 (-)
G1996216 NA non-coding downstream 71443 10621239 ~ 10622131 (-)
G1996326 NA non-coding downstream 326194 10367178 ~ 10367380 (-)
G1996325 NA non-coding downstream 326452 10366886 ~ 10367122 (-)
G1996507 NA non-coding upstream 4600 10738538 ~ 10738814 (-)
G1996521 NA non-coding upstream 30829 10764767 ~ 10764996 (-)
G1996524 NA non-coding upstream 35685 10769623 ~ 10770122 (-)
G1996525 NA non-coding upstream 36278 10770216 ~ 10770580 (-)
G1996526 NA non-coding upstream 38368 10772306 ~ 10773616 (-)
G1994812 NA other downstream 1191921 9500716 ~ 9501653 (-)
G1994786 NA other downstream 1245080 9447593 ~ 9448494 (-)
G1994674 NA other downstream 1512869 9177038 ~ 9180705 (-)
LOC110516734 LOC107593117 other downstream 1585415 9090166 ~ 9108249 (-)
LOC110527031 LOC106587988 other downstream 1944830 8564300 ~ 8805872 (-)
G1996632 NA other upstream 188078 10922016 ~ 10924533 (-)
G1996949 NA other upstream 684161 11418099 ~ 11418335 (-)
G1999856 NA other upstream 2603397 13337335 ~ 13338151 (-)
G1999980 LOC106561221 other upstream 2786748 13520686 ~ 13521520 (-)
G2000052 NA other upstream 2895846 13629784 ~ 13630075 (-)

Expression


Co-expression Network