Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC118944582 |
| gene name | NA |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048590.1 |
| NCBI id | CM023244.2 |
| chromosome length | 51113553 |
| location | 12781392 ~ 12781526 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XR_005039934.1 | True | 135 | mRNA | 0.50 | 1 | 12781392 | 12781526 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110506260 | LOC106561879 | coding | downstream | 40449 | 12715303 ~ 12740943 (-) |
| LOC110506259 | LOC106561880 | coding | downstream | 93112 | 12675564 ~ 12688280 (-) |
| LOC110506258 | LOC106561881 | coding | downstream | 164824 | 12570197 ~ 12616568 (-) |
| LOC110506257 | LOC106561882 | coding | downstream | 361702 | 12038132 ~ 12419690 (-) |
| LOC118944497 | NA | coding | downstream | 1455710 | 11323168 ~ 11325682 (-) |
| LOC118944583 | NA | coding | upstream | 10385 | 12791911 ~ 12792045 (-) |
| trmt61b | trmt61b | coding | upstream | 63953 | 12845479 ~ 12856664 (-) |
| LOC110506271 | LOC106561903 | coding | upstream | 1536778 | 14318304 ~ 14368873 (-) |
| LOC110506081 | prmt3 | coding | upstream | 1595892 | 14377418 ~ 14496552 (-) |
| LOC110506276 | LOC106587060 | coding | upstream | 1832060 | 14613586 ~ 14678505 (-) |
| G1999517 | NA | non-coding | downstream | 21664 | 12755464 ~ 12759728 (-) |
| G1999505 | LOC103376403 | non-coding | downstream | 36142 | 12745011 ~ 12745250 (-) |
| G1999502 | NA | non-coding | downstream | 39121 | 12742070 ~ 12742271 (-) |
| G1999488 | NA | non-coding | downstream | 67659 | 12713439 ~ 12713733 (-) |
| G1999479 | LOC100846954 | non-coding | downstream | 79360 | 12701700 ~ 12702032 (-) |
| G1999586 | NA | non-coding | upstream | 125876 | 12907402 ~ 12954741 (-) |
| G1999611 | NA | non-coding | upstream | 157978 | 12939504 ~ 12939821 (-) |
| G1999697 | NA | non-coding | upstream | 303861 | 13085387 ~ 13085707 (-) |
| G1999772 | NA | non-coding | upstream | 423167 | 13204693 ~ 13204918 (-) |
| G1999784 | NA | non-coding | upstream | 443180 | 13224706 ~ 13225022 (-) |
| G1996949 | NA | other | downstream | 1363057 | 11418099 ~ 11418335 (-) |
| G1996632 | NA | other | downstream | 1856859 | 10922016 ~ 10924533 (-) |
| G1994812 | NA | other | downstream | 3279739 | 9500716 ~ 9501653 (-) |
| G1994786 | NA | other | downstream | 3332898 | 9447593 ~ 9448494 (-) |
| G1994674 | NA | other | downstream | 3600687 | 9177038 ~ 9180705 (-) |
| G1999856 | NA | other | upstream | 555809 | 13337335 ~ 13338151 (-) |
| G1999980 | LOC106561221 | other | upstream | 739160 | 13520686 ~ 13521520 (-) |
| G2000052 | NA | other | upstream | 848258 | 13629784 ~ 13630075 (-) |
| G2000879 | NA | other | upstream | 1496615 | 14278141 ~ 14278746 (-) |
