LOC110506277


Basic Information

Item Value
gene id LOC110506277
gene name NA
gene type misc
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048590.1
NCBI id CM023244.2
chromosome length 51113553
location 14894495 ~ 14898577 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XR_005039896.1
CACTGCATGGAGACAGGTGGATAGAGTGGCAGCCATGTTCTTCTGAGTTTGATTGACAAGACAAGATGGAGCTGAAGGTGTGGGTGGAGGGTTTGGTAAGGGTGGTGTGCGGCTTATCACTGGAGACTCCCTGTCAGGATGTGGTCATCGCCCTCGCACAGGTTATTGGTCAGTCTCTGTCGGATGTAATTTCCTTTGTAATTTCCTCCAATCTCACTCCTATCTTGGTGTGTCTTTTCTACAGGTCAGACGGGTCGCTATGTTCTCATCCAGAAGCTACGAGGAACAGAGGGGCAGCTTGTGGCTGATGACTGTCCCTTAGAGTCTCTATTCTATCTGGGTCAGCTGGCCATCAAGGTCAAATTCATCTTGCGTTATACAGGCCCCTCCAGCACTGACAAACTTTACAGACCCACCCTGGATAGGGTTCACCCATAGAAAAAAGGGGTCCAAAAAGGAGAGGTGTCAGGTGCTGGAGAAGCCGAACAAGAAGTAACCTGCAGCAATTCATCCTGCAGACGGGTCTTCCCCCTACCCCCTCTTACTCTGACCCATCCCTGACCCAAATATTTTATGAAATATTCATTTTCTACAGATTTTGCAATAAAGATGACTTAATGTA
>XR_005039894.1
CTAATAGGATATCTTTGTGAAAGCCATTGTAGGAAGAATGCAAAACAGCCCTGCAAGAGTTAACATATGATGGTGGAATATAAGAAATGATTCCAAAGTCATCATAGATCAACTTTCTTTAATCAACCTAAACATACACTTACTGTTATTGTATCATCTGTAGCCTTACAACTCACTCAGCTGCATTCCAGAGCAGCGTTTCACTCTTCTGCGCTCTCCCCCAACCTGGGCTACAACTACTCATTACATATTTCAAGGTGCCGCTTTTTGACTTTTTGTATGCTCAGAAATCCTTTCCACTTGGACTTATCACAGTGAAGAGTCGGGCAACCAACTAAACGGAAGCCTAAACCAACAGGTGGATAGAGTGGCAGCCATGTTCTTCTGAGTTTGATTGACAAGACAAGATGGAGCTGAAGGTGTGGGTGGAGGGTTTGGTAAGGGTGGTGTGCGGCTTATCACTGGAGACTCCCTGTCAGGATGTGGTCATCGCCCTCGCACAGGTTATTGGTCAGTCTCTGTCGGATGTAATTTCCTTTGTAATTTCCTCCAATCTCACTCCTATCTTGGTGTGTCTTTTCTACAGGTCAGACGGGTCGCTATGTTCTCATCCAGAAGCTACGAGGAACAGAGGGGCAGCTTGTGGCTGATGACTGTCCCTTAGAGTCTCTATTCTATCTGGGTCAGCTGGCCATCAAGGTCAAATTCATCTTGCGTTATACAGGCCCCTCCAGCACTGACAAACTTTACAGACCCACCCTGGATAGGGTTCACCCATAGAAAAAAGGGGTCCAAAAAGGAGAGGTGTCAGGTGCTGGAGAAGCCGAACAAGAAGTAACCTGCAGCAATTCATCCTGCAGACGGGTCTTCCCCCTACCCCCTCTTACTCTGACCCATCCCTGACCCAAATATTTTATGAAATATTCATTTTCTACAGATTTTGCAATAAAGATGACTTAATGTA
>XR_005039895.1
CTAATAGGATATCTTTGTGAAAGCCATTGTAGGAAGAATGCAAAACAGCCCTGCAAGAGTTAACATATGATGGTGGAATATAAGAAATGATTCCAAAGTCATCATAGATCAACTTTCTTTAATCAACCTAAACATACACTTACTGTTATTGTATCATCTGTAGCCTTACAACTCACTCAGCTGCATTCCAGAGCAGCGTTTCACTCTTCTGCGCTCTCCCCCAACCTGGGCTACAACTACTCATTACATATTTCAAGGTGCCGCTTTTTGACTTTTTGTATGCTCAGAAATCCTTTCCACTTGGACTTATCACAGTGAAGAGTCGGGCAACCAACTAAACGGAAGCCTAAACCAACAGGTAAAGTAAGAGTAAACCTCAAACTCTGTTGTAATAACAGGTTTGTCTTCCTTCTGTCTGATGGAAATCAGAATGTAGGAGCTTTTACTGCTGGCTAACACTGCATGGAGACAGGTAAAGTAAGAGTAAAAACTCTGTTGTAATAACAGGTTTGTCTTCCTTCTGTCTGATGGAAATCAGAATGTAGGAGCTTTTACTGCTGGCTAACACTGCATGGAGACAGGTGGATAGAGTGGCAGCCATGTTCTTCTGAGTTTGATTGACAAGACAAGATGGAGCTGAAGGTGTGGGTGGAGGGTTTGGTAAGGGTGGTGTGCGGCTTATCACTGGAGACTCCCTGTCAGGATGTGGTCATCGCCCTCGCACAGGTTATTGGTCAGTCTCTGTCGGATGTAATTTCCTTTGTAATTTCCTCCAATCTCACTCCTATCTTGGTGTGTCTTTTCTACAGGTCAGACGGGTCGCTATGTTCTCATCCAGAAGCTACGAGGAACAGAGGGGCAGCTTGTGGCTGATGACTGTCCCTTAGAGTCTCTATTCTATCTGGGTCAGCTGGCCATCAAGGTCAAATTCATCTTGCGTTATACAGGCCCCTCCAGCACTGACAAACTTTACAGACCCACCCTGGATAGGGTTCACCCATAGAAAAAAGGGGTCCAAAAAGGAGAGGTGTCAGGTGCTGGAGAAGCCGAACAAGAAGTAACCTGCAGCAATTCATCCTGCAGACGGGTCTTCCCCCTACCCCCTCTTACTCTGACCCATCCCTGACCCAAATATTTTATGAAATATTCATTTTCTACAGATTTTGCAATAAAGATGACTTAATGTA
>TU2290365
AGAAATCCTTTCCACTTGGACTTATCACAGTGAAGAGTCGGGCAACCAACTAAACGGAAGCCTAAACCAACAGGTGGATAGAGTGGCAGCCATGTTCTTCTGAGTTTGATTGACAAGACAAGATGGAGCTGAAGGTGTGGGTGGAGGGTTTGGTAAGGGTGGTGTGCGGCTTATCACTGGAGACTCCCTGTCAGGATGTGGTCATCGCCCTCGCACAGGTCAGACGGGTCGCTATGTTCTCATCCAGAAGCTACGAGGAACAGAGGGGCAGCTTGTGGCTGATGACTGTCCCTTAGAGTCTCTATTCTATCTGGGAGAGGTGTCAGGTGCTGGAGAAGCCGAACAAGAAGTAACCTGCAGCAATTCATCCTGCAGACGGGTCTTCCCCCTACCCCCTCTTACTCTGACCCATCCCTGACCCAAATATTTTATGAAATATTCATTTTCTACAGATTTTGCAATAAAGATGACTTAATGTA
>TU2290369
AGAAATCCTTTCCACTTGGACTTATCACAGTGAAGAGTCGGGCAACCAACTAAACGGAAGCCTAAACCAACAGGTGGATAGAGTGGCAGCCATGTTCTTCTGAGTTTGATTGACAAGACAAGATGGAGCTGAAGGTGTGGGTGGAGGGTTTGGTAAGGGTGGTGTGCGGCTTATCACTGGAGACTCCCTGTCAGGATGTGGTCATCGCCCTCGCACAGGTCAGACGGGTCGCTATGTTCTCATCCAGAAGCTACGAGGAACAGAGGGGCAGCTTGTGGCTGATGACTGTCCCTTAGAGTCTCTATTCTATCTGGGTCAGCTGGCCATCAAGGTCAAATTCATCTTGCGTTATACAGGCCCCTCCAGCACTGACAAACTTTACAGACCCACCCTGGATAGGGTTCACCCATAGAAAAAAGGGGTCCAAAAAGGAGAGGTGTCAGGTGCTGGAGAAGCCGAACAAGAAGTAACCTGCAGCAATTCATCCTGCAGACGGGTCTTCCCCCTACCCCCTCTTACTCTGACCCATCCCTGACCCAAATATTTTATGAAATATTCATTTTCTACAGATTTTGCAATAAAGATGACTTAATGTA

Function

NR:

description
ras association domain-containing protein 7-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005039896.1 False 622 mRNA 0.48 3 14894495 14898121
XR_005039894.1 False 964 mRNA 0.45 3 14894495 14898577
XR_005039895.1 False 1187 mRNA 0.44 3 14894495 14898577
TU2290365 False 479 lncRNA 0.49 4 14894495 14898292
TU2290369 True 596 lncRNA 0.49 4 14894495 14898292

Neighbor

gene id symbol gene type direction distance location
LOC110506082 LOC106561908 coding downstream 105762 14703108 ~ 14788733 (-)
LOC110506276 LOC106587060 coding downstream 215990 14613586 ~ 14678505 (-)
LOC110506081 prmt3 coding downstream 397943 14377418 ~ 14496552 (-)
LOC110506271 LOC106561903 coding downstream 525622 14318304 ~ 14368873 (-)
trmt61b trmt61b coding downstream 2037831 12845479 ~ 12856664 (-)
LOC110506083 LOC106587061 coding upstream 187611 15086188 ~ 15095528 (-)
LOC110506281 LOC106561910 coding upstream 213992 15112569 ~ 15147518 (-)
LOC110506286 LOC106561915 coding upstream 901915 15800492 ~ 15809734 (-)
LOC110506287 LOC106587073 coding upstream 918268 15816845 ~ 15819030 (-)
LOC110506224 LOC106561917 coding upstream 930014 15828591 ~ 15832167 (-)
G2001520 NA non-coding downstream 113928 14710748 ~ 14780567 (-)
G2001519 NA non-coding downstream 184490 14709711 ~ 14710005 (-)
G2001511 NA non-coding downstream 194372 14699884 ~ 14700123 (-)
G2001489 NA non-coding downstream 220356 14663205 ~ 14674139 (-)
G2001633 NA non-coding upstream 5180 14903757 ~ 14904010 (-)
G2001824 NA non-coding upstream 185994 15084571 ~ 15085091 (-)
G2001905 NA non-coding upstream 209864 15108441 ~ 15111787 (-)
G2001919 NA non-coding upstream 249773 15148350 ~ 15148628 (-)
G2002280 NA non-coding upstream 418872 15317449 ~ 15371915 (-)
G2000879 NA other downstream 615749 14278141 ~ 14278746 (-)
G2000052 NA other downstream 1264420 13629784 ~ 13630075 (-)
G1999980 LOC106561221 other downstream 1372975 13520686 ~ 13521520 (-)
G1999856 NA other downstream 1556344 13337335 ~ 13338151 (-)
G2003219 LOC106561912 other upstream 816971 15715548 ~ 15718308 (-)
nav2a LOC106587075 other upstream 1057050 15900960 ~ 16211028 (-)
G2003819 LOC106561933 other upstream 1822414 16720991 ~ 16723682 (-)
G2005166 NA other upstream 2988868 17887445 ~ 17890081 (-)
G2005456 LOC106561978 other upstream 3295533 18194110 ~ 18199589 (-)

Expression


Co-expression Network