Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC110506278 |
| gene name | LOC106561909 |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048590.1 |
| NCBI id | CM023244.2 |
| chromosome length | 51113553 |
| location | 14916034 ~ 15085102 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: serine/threonine-protein kinase BRSK2-like isoform X3 |
| id | name | namespace |
|---|---|---|
| GO:0006468 | protein phosphorylation | biological_process |
| GO:0005524 | ATP binding | molecular_function |
| GO:0004674 | protein serine/threonine kinase activity | molecular_function |
| id | description |
|---|---|
| K08796 | BRSK; BR serine/threonine kinase |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XM_036963397.1 | False | 5566 | mRNA | 0.49 | 20 | 14916034 | 15085102 |
| XM_036963398.1 | False | 5518 | mRNA | 0.49 | 20 | 14916034 | 15085102 |
| XM_036963399.1 | False | 5506 | mRNA | 0.49 | 19 | 14916034 | 15085102 |
| XM_036963400.1 | False | 4872 | mRNA | 0.49 | 20 | 14916034 | 15085102 |
| XM_036963401.1 | False | 5080 | mRNA | 0.48 | 20 | 14916034 | 15085102 |
| XM_036963402.1 | True | 5020 | mRNA | 0.48 | 19 | 14916034 | 15085102 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110506274 | LOC106561907 | coding | upstream | 318887 | 14576878 ~ 14597147 (+) |
| rlbp1a | LOC106561906 | coding | upstream | 351459 | 14541917 ~ 14564575 (+) |
| LOC110506272 | LOC106561904 | coding | upstream | 394821 | 14499547 ~ 14521213 (+) |
| LOC110506270 | LOC106561902 | coding | upstream | 632903 | 13875220 ~ 14283131 (+) |
| LOC110506269 | cssa11h2orf71 | coding | upstream | 1094836 | 13814549 ~ 13821198 (+) |
| LOC110506282 | LOC106561911 | coding | downstream | 187400 | 15272502 ~ 15365797 (+) |
| LOC110506084 | LOC106561912 | coding | downstream | 554782 | 15639884 ~ 15672938 (+) |
| LOC110506283 | LOC106561912 | coding | downstream | 631646 | 15716748 ~ 15731540 (+) |
| LOC110506284 | LOC106561914 | coding | downstream | 649423 | 15734525 ~ 15800073 (+) |
| dbx1a | LOC106561921 | coding | downstream | 811410 | 15896512 ~ 15900668 (+) |
| G2001210 | NA | non-coding | upstream | 214562 | 14701246 ~ 14701472 (+) |
| G2001209 | NA | non-coding | upstream | 215407 | 14700385 ~ 14700627 (+) |
| G2001192 | NA | non-coding | upstream | 233463 | 14682254 ~ 14682571 (+) |
| G2001189 | NA | non-coding | upstream | 237416 | 14678013 ~ 14678618 (+) |
| G2001168 | NA | non-coding | upstream | 272309 | 14643415 ~ 14643725 (+) |
| G2001922 | NA | non-coding | downstream | 66315 | 15151417 ~ 15151648 (+) |
| G2001939 | NA | non-coding | downstream | 77814 | 15162916 ~ 15163151 (+) |
| G2001940 | NA | non-coding | downstream | 78782 | 15163884 ~ 15199799 (+) |
| G2002033 | NA | non-coding | downstream | 195329 | 15280431 ~ 15280668 (+) |
| G2002034 | NA | non-coding | downstream | 195696 | 15280798 ~ 15281030 (+) |
| G1998628 | NA | other | upstream | 1693353 | 13222037 ~ 13222681 (+) |
| G1994851 | NA | other | upstream | 5349880 | 9560723 ~ 9566154 (+) |
| G1994757 | LOC106613263 | other | upstream | 5525101 | 9390568 ~ 9390933 (+) |
| G1993783 | NA | other | upstream | 6217911 | 8697174 ~ 8698123 (+) |
| G1993771 | herc1 | other | upstream | 6247767 | 8666601 ~ 8668267 (+) |
| G2002614 | NA | other | downstream | 604666 | 15689768 ~ 15696280 (+) |
| G2002823 | NA | other | downstream | 986885 | 16071987 ~ 16074044 (+) |
| fshb | LOC100136594 | other | downstream | 1527383 | 16609650 ~ 16614319 (+) |
| G2004946 | LOC106587126 | other | downstream | 2785457 | 17870559 ~ 17880793 (+) |
