Gene
RNA
| Item | Value |
|---|---|
| gene id | mrpl21 |
| gene name | LOC106561938 |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048590.1 |
| NCBI id | CM023244.2 |
| chromosome length | 51113553 |
| location | 17109260 ~ 17113196 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| 39S ribosomal protein L21, mitochondrial isoform X1 |
| id | description |
|---|---|
| K02888 | RP-L21, MRPL21, rplU; large subunit ribosomal protein L21 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XM_021585800.2 | False | 749 | mRNA | 0.43 | 7 | 17109260 | 17113195 |
| XM_021585799.2 | True | 753 | mRNA | 0.43 | 7 | 17109260 | 17113196 |
17,107,000
17,108,000
17,109,000
17,110,000
17,111,000
17,112,000
17,113,000
17,114,000
17,115,000
17,116,000
17,117,000
17,118,000
17,119,000
NC_048590.1
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| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110506306 | LOC106561937 | coding | downstream | 20890 | 16925241 ~ 17088370 (-) |
| LOC110506304 | LOC106561935 | coding | downstream | 334293 | 16772852 ~ 16774967 (-) |
| bbox1 | LOC106561934 | coding | downstream | 337263 | 16746211 ~ 16771997 (-) |
| arl14ep | LOC106561931 | coding | downstream | 492092 | 16614782 ~ 16617168 (-) |
| LOC110506296 | LOC106587087 | coding | downstream | 513846 | 16557278 ~ 16595414 (-) |
| LOC110506308 | LOC106561939 | coding | upstream | 6762 | 17119958 ~ 17162230 (-) |
| c1qtnf4 | LOC106561941 | coding | upstream | 59867 | 17173063 ~ 17184398 (-) |
| LOC110506314 | LOC106587102 | coding | upstream | 113336 | 17226532 ~ 17255604 (-) |
| LOC110506315 | LOC106561944 | coding | upstream | 152241 | 17265437 ~ 17280548 (-) |
| mdka | LOC106561948 | coding | upstream | 346000 | 17459196 ~ 17477516 (-) |
| G2004672 | NA | non-coding | downstream | 5148 | 17103795 ~ 17104112 (-) |
| G2004314 | NA | non-coding | downstream | 20132 | 17088926 ~ 17089128 (-) |
| G2003905 | NA | non-coding | downstream | 306072 | 16802898 ~ 16803188 (-) |
| G2003886 | NA | non-coding | downstream | 317060 | 16791911 ~ 16792200 (-) |
| G2003885 | NA | non-coding | downstream | 317426 | 16791635 ~ 16791834 (-) |
| G2004681 | NA | non-coding | upstream | 4794 | 17117990 ~ 17118255 (-) |
| G2004686 | NA | non-coding | upstream | 48562 | 17161758 ~ 17162112 (-) |
| G2004716 | NA | non-coding | upstream | 146783 | 17259979 ~ 17260184 (-) |
| G2004722 | LOC107656180 | non-coding | upstream | 181006 | 17294202 ~ 17294809 (-) |
| G2003819 | LOC106561933 | other | downstream | 385578 | 16720991 ~ 16723682 (-) |
| nav2a | LOC106587075 | other | downstream | 1149695 | 15900960 ~ 16211028 (-) |
| G2003219 | LOC106561912 | other | downstream | 1390952 | 15715548 ~ 15718308 (-) |
| LOC110506276 | LOC106587060 | other | downstream | 2475652 | 14613586 ~ 14678505 (-) |
| G2000879 | NA | other | downstream | 2830514 | 14278141 ~ 14278746 (-) |
| G2005166 | NA | other | upstream | 774249 | 17887445 ~ 17890081 (-) |
| G2005456 | LOC106561978 | other | upstream | 1080914 | 18194110 ~ 18199589 (-) |
| G2005584 | NA | other | upstream | 1121078 | 18234274 ~ 18234536 (-) |
| G2009991 | NA | other | upstream | 4521083 | 21634279 ~ 21634592 (-) |
| lto1 | oraov1 | other | upstream | 5289822 | 22402983 ~ 22405876 (-) |
