Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC110506321 |
| gene name | LOC106561954 |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048590.1 |
| NCBI id | CM023244.2 |
| chromosome length | 51113553 |
| location | 17683324 ~ 17735109 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PHD finger protein 21A-like isoform X1 |
| id | description |
|---|---|
| K24651 | PHF21A; PHD finger protein 21A |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XM_021585856.2 | False | 6752 | mRNA | 0.44 | 18 | 17683324 | 17735109 |
| XM_021585857.2 | False | 6735 | mRNA | 0.44 | 18 | 17683324 | 17735109 |
| XM_036963430.1 | False | 6668 | mRNA | 0.44 | 17 | 17683324 | 17735109 |
| XM_036963431.1 | False | 6596 | mRNA | 0.44 | 17 | 17683324 | 17735109 |
| XM_036963432.1 | False | 6452 | mRNA | 0.44 | 17 | 17683324 | 17735109 |
| XM_036963433.1 | False | 6368 | mRNA | 0.43 | 16 | 17683324 | 17735109 |
| XR_005039674.1 | True | 6654 | mRNA | 0.44 | 19 | 17683324 | 17735109 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110506316 | LOC106561947 | coding | upstream | 225715 | 17292335 ~ 17457609 (+) |
| LOC110506312 | LOC106561942 | coding | upstream | 512083 | 17166284 ~ 17171241 (+) |
| LOC110506311 | NA | coding | upstream | 517757 | 17161288 ~ 17165567 (+) |
| LOC110506305 | LOC106561936 | coding | upstream | 857744 | 16809933 ~ 16825580 (+) |
| LOC110506300 | LOC106561933 | coding | upstream | 937926 | 16662126 ~ 16745398 (+) |
| LOC110506324 | LOC100380690 | coding | downstream | 6285 | 17741394 ~ 17754079 (+) |
| LOC110506331 | NA | coding | downstream | 65458 | 17800567 ~ 17807968 (+) |
| LOC110506330 | NA | coding | downstream | 79892 | 17815001 ~ 17816952 (+) |
| LOC100136233 | cd59 | coding | downstream | 88378 | 17823487 ~ 17825226 (+) |
| LOC110506332 | LOC106561966 | coding | downstream | 108220 | 17843329 ~ 17870267 (+) |
| G2004950 | NA | non-coding | upstream | 3714 | 17679353 ~ 17679610 (+) |
| G2004949 | NA | non-coding | upstream | 4549 | 17678331 ~ 17678775 (+) |
| G2004938 | NA | non-coding | upstream | 9920 | 17673149 ~ 17673404 (+) |
| G2004906 | NA | non-coding | upstream | 30813 | 17652301 ~ 17652511 (+) |
| G2004641 | NA | non-coding | upstream | 55693 | 17626177 ~ 17627631 (+) |
| G2004944 | LOC100136077 | non-coding | downstream | 25546 | 17760655 ~ 17766680 (+) |
| G2004976 | NA | non-coding | downstream | 50214 | 17785323 ~ 17785563 (+) |
| G2004977 | NA | non-coding | downstream | 50595 | 17785704 ~ 17785939 (+) |
| G2004978 | NA | non-coding | downstream | 51044 | 17786153 ~ 17786377 (+) |
| G2004980 | NA | non-coding | downstream | 55232 | 17790341 ~ 17790602 (+) |
| fshb | LOC100136594 | other | upstream | 1069142 | 16609650 ~ 16614319 (+) |
| G2002823 | NA | other | upstream | 1609280 | 16071987 ~ 16074044 (+) |
| LOC110506284 | LOC106561914 | other | upstream | 1883251 | 15734525 ~ 15800073 (+) |
| G2002614 | NA | other | upstream | 1987044 | 15689768 ~ 15696280 (+) |
| G1998628 | NA | other | upstream | 4460643 | 13222037 ~ 13222681 (+) |
| G2004946 | LOC106587126 | other | downstream | 135450 | 17870559 ~ 17880793 (+) |
| G2006213 | NA | other | downstream | 1034024 | 18769133 ~ 18769500 (+) |
| LOC110506373 | LOC106562010 | other | downstream | 2744349 | 20479458 ~ 20482966 (+) |
| G2008616 | NA | other | downstream | 2978254 | 20713363 ~ 20713673 (+) |
| G2009636 | NA | other | downstream | 3877925 | 21613034 ~ 21613429 (+) |
