LOC110506532 (LOC100136691)


Basic Information

Item Value
gene id LOC110506532
gene name LOC100136691
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048590.1
NCBI id CM023244.2
chromosome length 51113553
location 27766212 ~ 27768873 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021586216.2
ACTTCTCACTTTGGCTTTTTGCCGATTATAGCTGGCCATCTAGCTGCCTTGGTTTTAACCAAGCGTGACGATGTCATTAGAAGTTGGTTCTGCGGTAACTTTTTACAATCTGGACTAGctaatgtgtttttgtgtgcatgTTACTCACAGCTAACGTTACTGGCGATATGTAGTTAGCTAGCCAATTTGCTATCTAGTAGGTAACGTTAAGCAACTAGGAAATAAATGCTGGAAAACGAGCGTATGCTTTGCCTAAAATAAAGTTACGTAAGCGGGCAAAACATTTAGCTAGTTAAGGAACGCAGACAACCCAACACTAATGGGAAAAGCAAACGTAGCTGGAGCAGGAAGGGCTGTGCTTGGAGAGCTGTCCAACTTTCCCAATGCTTGCAAAGCGGTGCCGTTCAAGaAGACCGTTCCTGCCAAGGCCTCAACCAAACAATCTATGAACCAACAAGACCAGCCCGCAGCTGTTTGGCCTAAAgttcctcagcctgaagtgtatGCTAACGTGTCCATGAAGGAAGAGGAATTGTGCCAGGCGTTCTCAGAAGCTCTGCTTGCTGTAGAAGACATTGATGAAGGGGATTCAGACCTGCCACAACTGTGCTCTGAATATATAAAGGATATCTATGGATATCTGCAGCGCCTTGAGACCCAGCAGTCTGTTCGGGCCAAGTACATGAGTGGCTATGAGATCAATGGACGCATGCGTGCTCTcctgattgactggctgattcAGGTGCACTCCAGGTTCCAGCTATTGCAGGAGACTCTCTATCTGACGGTGGCCATCCTGGATCGCTTTCTTCAGGTGCAAACTATTGGCCGCAAGAAGCTCCAGCTGGTTGGTGTGACTGCCATGTTGTTGGCGTCTAAGTATGAAGAGATGTATTCCCCGGAGATAGGTGATTTTGTTTACATCACAGACAATGCATTCACCAAGGCCCATATTCGGGAGATGGAGCAGCTGATTCTGCGAAGTCTGAACTTTGAGCTTGGACGGCCTCTACCCCTGCACTTCCTCAGGAGAGCCTCCAAGGCTGGCAATGCTGACGTTGAGAAGCACACATTAGCCAAGTACCTCATGGAACTGACCCTCCTTGACTATGACATGGTGCACTACCATCCTTCTGAGATTGCTGCTGCTGCCTTGTGCCTCTCCCAGCTGCTGCTTGATGAGCTCAACTGGACTCCAACACAGGAGCACTACTCTACCTATAATGAGAACCACCTCAAGCCAATCATGGAGCACATTGCCAAAAACATAGTTTCTGTCAATGAAGGGCGAACAAAGCTTCAGGCTGTCAAGAACAAGTATTGGATCAGCCTCATCCCTCAGCTGAAGTCTACCTTTGTAAATTACATGGCTCTGCTCTCATGACGTGAATGCCGCACTTTATTTTTAAGAAAATCCATTGTGAGATGGCCTTTTGGACTGCTGCTTTTAAGTACATGTAAATATTTAACTTTTTACAAATAAACATCGATGTGTAGCAATGAA
>XM_021586215.2
TGATGCGGAATCCAATTAGAATCAACAGAGCGGTATTtgaatgactgtggaatggttcTTTGACACTTCTCACTTTGGCTTTTTGCCGATTATAGCTGGCCATCTAGCTGCCTTGGTTTTAACCAAGCGTGACGATGTCATTAGAAGTTGGTTCTGCGTTAAGGAACGCAGACAACCCAACACTAATGGGAAAAGCAAACGTAGCTGGAGCAGGAAGGGCTGTGCTTGGAGAGCTGTCCAACTTTCCCAATGCTTGCAAAGCGGTGCCGTTCAAGaAGACCGTTCCTGCCAAGGCCTCAACCAAACAATCTATGAACCAACAAGACCAGCCCGCAGCTGTTTGGCCTAAAgttcctcagcctgaagtgtatGCTAACGTGTCCATGAAGGAAGAGGAATTGTGCCAGGCGTTCTCAGAAGCTCTGCTTGCTGTAGAAGACATTGATGAAGGGGATTCAGACCTGCCACAACTGTGCTCTGAATATATAAAGGATATCTATGGATATCTGCAGCGCCTTGAGACCCAGCAGTCTGTTCGGGCCAAGTACATGAGTGGCTATGAGATCAATGGACGCATGCGTGCTCTcctgattgactggctgattcAGGTGCACTCCAGGTTCCAGCTATTGCAGGAGACTCTCTATCTGACGGTGGCCATCCTGGATCGCTTTCTTCAGGTGCAAACTATTGGCCGCAAGAAGCTCCAGCTGGTTGGTGTGACTGCCATGTTGTTGGCGTCTAAGTATGAAGAGATGTATTCCCCGGAGATAGGTGATTTTGTTTACATCACAGACAATGCATTCACCAAGGCCCATATTCGGGAGATGGAGCAGCTGATTCTGCGAAGTCTGAACTTTGAGCTTGGACGGCCTCTACCCCTGCACTTCCTCAGGAGAGCCTCCAAGGCTGGCAATGCTGACGTTGAGAAGCACACATTAGCCAAGTACCTCATGGAACTGACCCTCCTTGACTATGACATGGTGCACTACCATCCTTCTGAGATTGCTGCTGCTGCCTTGTGCCTCTCCCAGCTGCTGCTTGATGAGCTCAACTGGACTCCAACACAGGAGCACTACTCTACCTATAATGAGAACCACCTCAAGCCAATCATGGAGCACATTGCCAAAAACATAGTTTCTGTCAATGAAGGGCGAACAAAGCTTCAGGCTGTCAAGAACAAGTATTGGATCAGCCTCATCCCTCAGCTGAAGTCTACCTTTGTAAATTACATGGCTCTGCTCTCATGACGTGAATGCCGCACTTTATTTTTAAGAAAATCCATTGTGAGATGGCCTTTTGGACTGCTGCTTTTAAGTACATGTAAATATTTAACTTTTTACAAATAAACATCGATGTGTAGCAATGAA

Function

NR:

description
G2/mitotic-specific cyclin-B2 isoform X1

GO:

id name namespace
GO:0051726 regulation of cell cycle biological_process
GO:0051301 cell division biological_process

KEGG:

id description
K21770 CCNB2; G2/mitotic-specific cyclin-B2

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021586216.2 False 1504 mRNA 0.46 8 27766212 27768809
XM_021586215.2 True 1370 mRNA 0.47 8 27766212 27768873
Loading

Neighbor

gene id symbol gene type direction distance location
mtmr10 LOC106562206 coding downstream 76430 27661810 ~ 27689782 (-)
LOC110506529 atxn1l coding downstream 106624 27647946 ~ 27659588 (-)
LOC110506526 LOC106587331 coding downstream 137367 27600225 ~ 27628845 (-)
LOC110506525 LOC106587351 coding downstream 170356 27547274 ~ 27595856 (-)
LOC110506522 LOC106587329 coding downstream 227891 27510708 ~ 27538321 (-)
rnf111 rnf111 coding upstream 3837 27772710 ~ 27823508 (-)
LOC110506536 fam63b coding upstream 75943 27844796 ~ 27868733 (-)
LOC110506099 lipc coding upstream 302257 28071130 ~ 28077082 (-)
LOC110506537 aqp9 coding upstream 314872 28083745 ~ 28098030 (-)
polr2m NA coding upstream 402222 28171095 ~ 28173731 (-)
G2016810 NA non-coding downstream 607 27764433 ~ 27765605 (-)
G2016816 NA non-coding downstream 3923 27761155 ~ 27762289 (-)
G2016803 NA non-coding downstream 5754 27760240 ~ 27760458 (-)
G2016802 NA non-coding downstream 6021 27759564 ~ 27760191 (-)
G2016799 NA non-coding downstream 11971 27753892 ~ 27754241 (-)
G2016815 NA non-coding upstream 1137 27770010 ~ 27770827 (-)
G2016831 NA non-coding upstream 54952 27823825 ~ 27824036 (-)
G2016834 LOC105030512 non-coding upstream 56740 27825613 ~ 27825885 (-)
G2016845 NA non-coding upstream 92981 27861854 ~ 27862088 (-)
G2016013 NA other downstream 679947 27085930 ~ 27086265 (-)
G2015737 NA other downstream 981551 26778739 ~ 26784661 (-)
G2015718 NA other downstream 1030976 26685349 ~ 26735236 (-)
G2015668 NA other downstream 1163953 26601779 ~ 26602259 (-)
bola3 bola3 other downstream 1489396 26272579 ~ 26276831 (-)
G2017021 NA other upstream 309024 28077897 ~ 28078556 (-)
G2018044 rsl24d1 other upstream 940031 28708904 ~ 28712453 (-)
G2018139 cmtr2 other upstream 1146089 28914962 ~ 28917197 (-)
G2018367 NA other upstream 1521762 29290635 ~ 29291601 (-)

Expression

LOC110506532(LOC100136691) Expression in all Baseline Samples

Bar chart with 20 bars.
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 500.
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LOC110506532(LOC100136691) Expression in each Bioproject

Bar chart with 21 bars.
LOC110506532(LOC100136691) Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 600.
End of interactive chart.

Co-expression Network