Item | Value |
---|---|
gene id | LOC110506676 |
gene name | pde3b |
gene type | coding |
species | rainbow trout (Oncorhynchus mykiss) |
category of species | economic fish |
Item | Value |
---|---|
chromosome id | NC_048590.1 |
NCBI id | CM023244.2 |
chromosome length | 51113553 |
location | 33846010 ~ 33927989 (-) |
genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
symbol | description |
---|---|
pde3b | Predicted to enable 3',5'-cyclic-nucleotide phosphodiesterase activity and metal ion binding activity. Predicted to act upstream of or within signal transduction. Predicted to be located in membrane. Predicted to be integral component of membrane. Is expressed in oocyte and oocyte stage V. Orthologous to human PDE3B (phosphodiesterase 3B). |
description |
---|
cGMP-inhibited 3',5'-cyclic phosphodiesterase B-like |
id | description |
---|---|
K13296 | PDE3B; cGMP-inhibited 3',5'-cyclic phosphodiesterase B |
RNA id | representative | length | rna type | GC content | exon number | start site | end site |
---|---|---|---|---|---|---|---|
XM_036963254.1 | False | 6283 | mRNA | 0.49 | 16 | 33846010 | 33927988 |
XM_036963255.1 | True | 6281 | mRNA | 0.49 | 16 | 33846010 | 33927989 |
gene id | symbol | gene type | direction | distance | location |
---|---|---|---|---|---|
LOC100136595 | calc1 | coding | downstream | 30367 | 33800216 ~ 33815643 (-) |
LOC118944422 | NA | coding | downstream | 457065 | 33386852 ~ 33388945 (-) |
nucb2a | LOC106562318 | coding | downstream | 677782 | 33159342 ~ 33168228 (-) |
LOC110506670 | LOC106587508 | coding | downstream | 919743 | 32900561 ~ 32926267 (-) |
LOC110506665 | polr2l | coding | downstream | 1014895 | 32829426 ~ 32831115 (-) |
LOC110506684 | LOC106587537 | coding | upstream | 186520 | 34109965 ~ 34118269 (-) |
LOC110506685 | rbtn1 | coding | upstream | 224687 | 34152676 ~ 34184095 (-) |
LOC110506117 | LOC106587539 | coding | upstream | 425784 | 34353773 ~ 34358034 (-) |
LOC110506686 | LOC106562363 | coding | upstream | 448197 | 34376186 ~ 34390655 (-) |
LOC110506687 | LOC106562362 | coding | upstream | 461660 | 34389577 ~ 34417992 (-) |
G2023105 | LOC106587531 | non-coding | downstream | 30128 | 33814888 ~ 33815882 (-) |
G2023023 | NA | non-coding | downstream | 170295 | 33675390 ~ 33675715 (-) |
G2023017 | NA | non-coding | downstream | 178467 | 33667334 ~ 33667543 (-) |
G2023013 | NA | non-coding | downstream | 181874 | 33663810 ~ 33664136 (-) |
G2023005 | NA | non-coding | downstream | 192692 | 33652761 ~ 33653318 (-) |
G2023088 | LOC106587500 | non-coding | upstream | 8537 | 33936526 ~ 33936874 (-) |
G2023086 | copb | non-coding | upstream | 9841 | 33937830 ~ 33939712 (-) |
G2023085 | NA | non-coding | upstream | 12536 | 33940525 ~ 33941420 (-) |
G2023172 | NA | non-coding | upstream | 49649 | 33977638 ~ 33990652 (-) |
G2023221 | NA | non-coding | upstream | 123309 | 34051298 ~ 34064510 (-) |
G2022042 | LOC106562320 | other | downstream | 967239 | 32875255 ~ 32878771 (-) |
G2021975 | NA | other | downstream | 1011529 | 32831627 ~ 32834481 (-) |
G2021979 | NA | other | downstream | 1027030 | 32810623 ~ 32818980 (-) |
G2021956 | NA | other | downstream | 1129097 | 32716126 ~ 32716913 (-) |
LOC110506691 | LOC106562361 | other | upstream | 572864 | 34499589 ~ 34523950 (-) |
G2024673 | NA | other | upstream | 948433 | 34876422 ~ 34928381 (-) |
G2024949 | NA | other | upstream | 1468085 | 35396074 ~ 35399967 (-) |
G2025061 | NA | other | upstream | 1567798 | 35495787 ~ 35497803 (-) |
LOC110506721 | LOC106562390 | other | upstream | 1620271 | 35401501 ~ 35548790 (-) |