Item | Value |
---|---|
gene id | LOC110506691 |
gene name | LOC106562361 |
gene type | misc |
species | rainbow trout (Oncorhynchus mykiss) |
category of species | economic fish |
Item | Value |
---|---|
chromosome id | NC_048590.1 |
NCBI id | CM023244.2 |
chromosome length | 51113553 |
location | 34499589 ~ 34523950 (-) |
genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
description |
---|
PREDICTED: signal peptide, CUB and EGF-like domain-containing protein 2 |
RNA id | representative | length | rna type | GC content | exon number | start site | end site |
---|---|---|---|---|---|---|---|
XM_036964100.1 | False | 3992 | mRNA | 0.47 | 19 | 34499589 | 34523948 |
XM_036964098.1 | False | 4323 | mRNA | 0.48 | 22 | 34499589 | 34523949 |
XM_036964099.1 | False | 4320 | mRNA | 0.48 | 22 | 34499589 | 34523949 |
XM_021586492.2 | False | 4495 | mRNA | 0.48 | 23 | 34499589 | 34523950 |
XM_021586493.2 | False | 4492 | mRNA | 0.48 | 23 | 34499589 | 34523950 |
TU2314697 | True | 663 | TUCP | 0.50 | 5 | 34500853 | 34502486 |
gene id | symbol | gene type | direction | distance | location |
---|---|---|---|---|---|
LOC110506690 | tmm9b | coding | downstream | 677 | 34492474 ~ 34498912 (-) |
LOC110506688 | st5 | coding | downstream | 7489 | 34418201 ~ 34492100 (-) |
LOC110506687 | LOC106562362 | coding | downstream | 81597 | 34389577 ~ 34417992 (-) |
LOC110506686 | LOC106562363 | coding | downstream | 108934 | 34376186 ~ 34390655 (-) |
LOC110506117 | LOC106587539 | coding | downstream | 141555 | 34353773 ~ 34358034 (-) |
LOC110506692 | fa60a | coding | upstream | 1047 | 34524997 ~ 34530228 (-) |
LOC110506693 | LOC106562359 | coding | upstream | 6638 | 34530588 ~ 34583094 (-) |
LOC110506695 | LOC106562360 | coding | upstream | 61174 | 34585124 ~ 34600542 (-) |
LOC118944477 | NA | coding | upstream | 254764 | 34778714 ~ 34786413 (-) |
LOC110506710 | LOC106562348 | coding | upstream | 342981 | 34866931 ~ 34879117 (-) |
G2023763 | NA | non-coding | downstream | 82944 | 34416403 ~ 34416645 (-) |
G2023761 | NA | non-coding | downstream | 84861 | 34414430 ~ 34414728 (-) |
G2023759 | NA | non-coding | downstream | 86875 | 34412505 ~ 34412714 (-) |
G2023749 | NA | non-coding | downstream | 115780 | 34383493 ~ 34383809 (-) |
G2023798 | NA | non-coding | upstream | 20085 | 34544035 ~ 34632407 (-) |
G2023723 | ipo7 | non-coding | upstream | 97269 | 34621219 ~ 34622187 (-) |
G2023726 | NA | non-coding | upstream | 98437 | 34622387 ~ 34623840 (-) |
G2023961 | NA | non-coding | upstream | 185786 | 34709736 ~ 34710366 (-) |
LOC100136595 | calc1 | other | downstream | 695265 | 33800216 ~ 33815643 (-) |
G2022042 | LOC106562320 | other | downstream | 1620818 | 32875255 ~ 32878771 (-) |
G2021975 | NA | other | downstream | 1665108 | 32831627 ~ 32834481 (-) |
G2021979 | NA | other | downstream | 1680609 | 32810623 ~ 32818980 (-) |
G2021956 | NA | other | downstream | 1782676 | 32716126 ~ 32716913 (-) |
G2024673 | NA | other | upstream | 352472 | 34876422 ~ 34928381 (-) |
G2024949 | NA | other | upstream | 872124 | 35396074 ~ 35399967 (-) |
G2025061 | NA | other | upstream | 971837 | 35495787 ~ 35497803 (-) |
LOC110506721 | LOC106562390 | other | upstream | 1024310 | 35401501 ~ 35548790 (-) |
G2025757 | NA | other | upstream | 1819206 | 36343156 ~ 36343434 (-) |
G2023780 | NA | non-coding | upstream | 580 | 34503066 ~ 34503345 (-) |
G2023781 | NA | non-coding | upstream | 1013 | 34503499 ~ 34503712 (-) |
G2023784 | NA | non-coding | upstream | 4746 | 34507232 ~ 34507502 (-) |
G2023785 | NA | non-coding | upstream | 10520 | 34513006 ~ 34513258 (-) |
G2023787 | NA | non-coding | upstream | 11244 | 34513730 ~ 34513937 (-) |