Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC110506693 |
| gene name | LOC106562359 |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048590.1 |
| NCBI id | CM023244.2 |
| chromosome length | 51113553 |
| location | 34530588 ~ 34583094 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| DENN domain-containing protein 5A-like isoform X4 |
| id | description |
|---|---|
| K20164 | DENND5; DENN domain-containing protein 5 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XM_021586497.2 | False | 8623 | mRNA | 0.45 | 24 | 34530588 | 34583090 |
| XM_021586499.2 | False | 8533 | mRNA | 0.45 | 23 | 34530588 | 34583090 |
| XM_021586500.2 | False | 8464 | mRNA | 0.45 | 22 | 34530588 | 34583090 |
| XM_036964402.1 | False | 8554 | mRNA | 0.45 | 23 | 34530588 | 34583090 |
| XM_036964403.1 | True | 6004 | mRNA | 0.46 | 16 | 34541053 | 34583094 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110506692 | fa60a | coding | downstream | 360 | 34524997 ~ 34530228 (-) |
| LOC110506691 | LOC106562361 | coding | downstream | 6638 | 34499589 ~ 34523950 (-) |
| LOC110506690 | tmm9b | coding | downstream | 31676 | 34492474 ~ 34498912 (-) |
| LOC110506688 | st5 | coding | downstream | 38488 | 34418201 ~ 34492100 (-) |
| LOC110506687 | LOC106562362 | coding | downstream | 112596 | 34389577 ~ 34417992 (-) |
| LOC110506695 | LOC106562360 | coding | upstream | 2030 | 34585124 ~ 34600542 (-) |
| LOC118944477 | NA | coding | upstream | 195620 | 34778714 ~ 34786413 (-) |
| LOC110506710 | LOC106562348 | coding | upstream | 283837 | 34866931 ~ 34879117 (-) |
| LOC110506712 | LOC106562346 | coding | upstream | 316691 | 34899785 ~ 34905525 (-) |
| pepd | LOC106562343 | coding | upstream | 455491 | 35038585 ~ 35049686 (-) |
| G2023790 | NA | non-coding | downstream | 15266 | 34515117 ~ 34515322 (-) |
| G2023789 | NA | non-coding | downstream | 15623 | 34514637 ~ 34514965 (-) |
| G2023787 | NA | non-coding | downstream | 16651 | 34513730 ~ 34513937 (-) |
| G2023785 | NA | non-coding | downstream | 17330 | 34513006 ~ 34513258 (-) |
| G2023723 | ipo7 | non-coding | upstream | 38125 | 34621219 ~ 34622187 (-) |
| G2023726 | NA | non-coding | upstream | 39293 | 34622387 ~ 34623840 (-) |
| G2023961 | NA | non-coding | upstream | 126642 | 34709736 ~ 34710366 (-) |
| G2023963 | NA | non-coding | upstream | 128324 | 34711418 ~ 34711650 (-) |
| G2023967 | NA | non-coding | upstream | 131119 | 34714213 ~ 34714587 (-) |
| LOC100136595 | calc1 | other | downstream | 726264 | 33800216 ~ 33815643 (-) |
| G2022042 | LOC106562320 | other | downstream | 1651817 | 32875255 ~ 32878771 (-) |
| G2021975 | NA | other | downstream | 1696107 | 32831627 ~ 32834481 (-) |
| G2021979 | NA | other | downstream | 1711608 | 32810623 ~ 32818980 (-) |
| G2024673 | NA | other | upstream | 293328 | 34876422 ~ 34928381 (-) |
| G2024949 | NA | other | upstream | 812980 | 35396074 ~ 35399967 (-) |
| G2025061 | NA | other | upstream | 912693 | 35495787 ~ 35497803 (-) |
| LOC110506721 | LOC106562390 | other | upstream | 965166 | 35401501 ~ 35548790 (-) |
| G2025757 | NA | other | upstream | 1760062 | 36343156 ~ 36343434 (-) |
