LOC110506147 (bend2)


Basic Information

Item Value
gene id LOC110506147
gene name bend2
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048590.1
NCBI id CM023244.2
chromosome length 51113553
location 42067732 ~ 42070472 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036963914.1
ATTTCACGAAATCGTAACATTTGTAAACAAGGCTGTTCTGGCAGCAGAACTTCGAAATCGGAAACCCGCAAACGCATTCACAGGGGAAATATTTGGCATAAACATACGACAGCTTAGCTAACCATCTAATGCTAGTTAGTTAACGTCGTTAACCAGAATTGAACACCTAGCTACGGACCTTCAAAATGCAATGTTGTGTTTGGGGGTGCAAGGCCCAATATCGGAAAGGAGGAGGGTTAGGGTTTTTCCGATTCCCTACTGGAGAGAACGAAATTGCTCAAAATCAAAGGAAAACTTGGATAAAAATGGTGAAGATTGAAAACCCCGAACCAGATCTGCCTTCCCGTTTGGGTGGTAAATTGGTACTCCAAATGGGAAACGACTGGcaccctactacctcctctcGCATTTGTGGGAGGCACTTTGTTTTAAAAAAACCAAACCTACATCCGGACCACCCTGACTTTGCCCCATCCCTCTTCCTTCGCCCAGAGGACGATGCCTTGAGTCCGAACACAGCTCAGACAGAAGGGAAAAGAAACCTGCAGAGCTATGACAGGGcagtgaagaagaagaagtgccTTGACCTTAGTGAGGTTGGAGGTGCTGACCTGAGGGACAGTTATGCTGACACCACAGAAGAAACTGAAGAGCAGGACCTGGGCACCTGTGTATCGTGTGAGGTCCTGAGGAAGTCCTTAAATTATTTGCAGTCCAGGCATGATGCTCTGCAAGTCGAAGCTGTCAATCTCAGGGCGGAGAGAGACTTTTACAAATATAACACATCTCAATCCTCTCTCTTTGTTGACACCTTTACAGACAGAGACAATCAAATGCATACAGTGAGAGAAGTGCCAAGCATGGCTAAACCAAATGGTATGAACCAACAATGTACTGGGATGGTTGAGGAGCCCTGTCTTATGGAGGTTGAGGGGTTATGTTCTGTGAAGGTTGAGGAGCTTTGTCCTGTGAAGGTTGAGGGGGACTATGATCAAGTGTTGATTAAGGAAGAGGAACAACAGGTCCAAATAGAACTTTGTAGCCCCTTGGCTAGTCAGGACAAAGTGACCCATGTCTCCCAGGATAAACCTACCCAGCATAGCAATATTATGAAGGCCACCAGGCGACCATGTCTGTTAGCTCAGCATAAACCCATCCAGATAGTCAACACAATGTCACTCACCGGGGTGGTAGCCCCCAGGCCCCCAAGTCAGGTAACCAAGGATAAACCTATCCAGCTTGCCAAAACCAACAACCAATGTTCTGTGAAGGTTGAGGAGTCATGTTTTGTGAAGGTTGAGGTGGACTATGATCAAATGTCGATTAAGGAAGCAGAGCAACAGGTCCAAATAGAAATCTGTAGCCCCTTGGCTAGTCAAGACAAAGTGACCAATGTCTCTCGCAGGTTGCCAATTCATGTCCCCAAGGATAAAACTATCCAGCTTGCCAAAGCCGTAGTAGAAAGCCACCTAATGACGAACCATCTGCCTGGCAGCCAAACCACTGCTGAGCCTTTACAGAAGACTCCTCTGTCAGCTCAAACGACACCTGTTGCAGGCAAACAAATTCAGAGAAgcataacacacacagagagggatgaGTTGCTTTGGCTGGGCTACATGAAGTGGAATGTGCGTCTTCCTGCAAGCACAATTAGAACCGCACACAAGTTTCAGACGCCTAGGGCAACAGTGCAATACCTTCTACACGCGGTCTTCTCCCAATGTGAACTCGCCACCAGCAATCTCAAGGGCATTCCTGCACTGGGCCTTAACAAACTGGACCCGGACAAACTTTCTGCCATAAGACAGTTTGTCACCACCAAGTTTCGTCGTTTAGACATGCGTCAATGTGGTAAAGACTGGGTCAAGTGCCGGCGCCAGATAACCAGCATGCTCCGGAACATTCGGAAGGAGGACAGGAAGTCGAGGGGGCTCTCAGGAAACCTTTGTATGATAGAGAAGGTGTTAACGGATCAGAGTTTACCCCGTCAGCCATCGCCTCCCTCATTCCCCTCGATCTCCCAACAGCACACAGCTGCCTTCTACAACccaacagaagaagaagagatcCTCTGTCTGGAGAGTTAGGTTACACAATATCTGCAATGATGTTTGCATTTTCTTGAAATAAACAGTTTGTTGGgagtaaaaaaa

Function

symbol description
bend2 Predicted to enable DNA binding activity.

NR:

description
uncharacterized protein LOC110506149

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036963914.1 True 2156 mRNA 0.47 2 42067732 42070472

Neighbor

gene id symbol gene type direction distance location
LOC110506148 LOC106587747 coding downstream 11164 41986285 ~ 42056568 (-)
LOC110506839 NA coding downstream 81637 41984638 ~ 41986095 (-)
LOC118936287 NA coding downstream 151201 41906824 ~ 41916531 (-)
LOC118944569 NA coding downstream 156728 41910803 ~ 41911004 (-)
LOC110506831 NA coding downstream 172437 41891935 ~ 41895295 (-)
LOC118944459 tubgcp4 coding upstream 47949 42118421 ~ 42138004 (-)
LOC110506841 cart coding upstream 77292 42147360 ~ 42148871 (-)
LOC118944568 LOC106562433 coding upstream 144429 42214901 ~ 42217502 (-)
LOC110506162 serinc4 coding upstream 392109 42462581 ~ 42509613 (-)
LOC110506854 mfap1 coding upstream 441808 42512280 ~ 42516373 (-)
G2031017 NA non-coding downstream 6172 42060878 ~ 42061560 (-)
G2031004 NA non-coding downstream 35373 42031782 ~ 42032359 (-)
G2030984 NA non-coding downstream 88789 41978494 ~ 41978943 (-)
G2030982 NA non-coding downstream 90096 41974255 ~ 41977636 (-)
G2030945 NA non-coding downstream 146293 41903314 ~ 41921439 (-)
G2031029 NA non-coding upstream 24161 42094633 ~ 42094991 (-)
G2031002 NA non-coding upstream 26676 42097148 ~ 42099490 (-)
G2031083 NA non-coding upstream 149033 42219505 ~ 42220377 (-)
G2031201 LOC106562619 non-coding upstream 216184 42286656 ~ 42288310 (-)
G2031224 NA non-coding upstream 231581 42302053 ~ 42383608 (-)
LOC110515873 LOC106562546 other downstream 499819 41461857 ~ 41567947 (-)
G2030291 NA other downstream 855880 41211477 ~ 41211852 (-)
G2030156 NA other downstream 1160539 40906623 ~ 40907193 (-)
G2030162 NA other downstream 1168711 40898470 ~ 40899021 (-)
G2030157 NA other downstream 1179048 40887603 ~ 40888684 (-)
G2031225 NA other upstream 272810 42343282 ~ 42346725 (-)
G2031259 NA other upstream 297782 42368254 ~ 42369909 (-)
G2031286 LOC106562727 other upstream 388785 42459257 ~ 42461315 (-)

Expression


Co-expression Network