LOC110526670


Basic Information

Item Value
gene id LOC110526670
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048590.1
NCBI id CM023244.2
chromosome length 51113553
location 42524581 ~ 42526465 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021607810.2
GTCCGTATAGCCTCTCCCTGGAGGAACGCGCCCTTAAAGAGAAGGCAGAGACGCTGACATCACTGAGATGTGCCAATTTGATAAATGGTGATCAAACGTTAATATACTGTCTGTATTGTGTGTCAATAACTACTTTTACAGCATGAGTTCAGATTCTGTCATTTTGTTGGAGACGGTTAACTTCGCTGCTGAAAAGCACCGCAATCAACGACGTAAAGATGCTGAACAAACACCATATATCACCCACCCAATAGGAGTGGCAAGGATCCTAAGCCATGAAGGTGGGATCACAGACATTGAAGTTTTGCAAGCAGCTTTGCTCCATGACACAGTGGAGGACACTGACACCAGCATAGGAGAGCTACAGATCGTCTTTGGGCAAACGGTGGCGCGGCTGGTCCAGGAAGTGACAGACGACAAAGCACTGTCCAAGGAGGAGACAAAGCGTAAGCAGGTGGAGTATGCACCTCATGCCAGCCACCAGGCCAAACTGGTCAAACTGGCTGACAAACTATACAACCTGAGGGACATCAACCGCAGCACGCCAACAGGTTGGTCGACAGAGCGTGTTCAGGAGTACTTTGTGTGGGCAGCCCAGGTAGTGAGAGGACTGAGGGGGACCAACCCAGCACTGGAGAGACAACTAGAGGAGCTCTTCAAGCAGAGGGGGGTTGAGCTTTGACACCTCTCTACTTCTGATACAGGGTGGCACAACAGAGCAACTCTTGATGCACACTTTTTGTAAAGAGTAAGACTTTAAGCGAATTGTCTTTGTTAGCTTCTCCATGGAATATACTTTTATATAGTCTTAGCTCTCACAAGGAAAAAGCCCACTTACTTTGGATTTATTTTTATGGATGATTTGATTCTTCATTTGAAGTACAGTGATTTGTATACATTGTGTGTTCCTATAGGAAAACCAACAATGTCACCTTGAGTTCTAGCTGTATTGACTAAAGGAATGCTATGCACTCGTAATGGTGAACATTGTTCAATTATATGGTGATGCAGAACCTGTAACTACTCTGTCATGTCACACTGaactcaaatatatttttgtatagatttttttt
>XM_021607811.2
GTCCGTATAGCCTCTCCCTGGAGGAACGCGCCCTTAAAGAGAAGGCAGAGACGCTGACATCACTGAGATGTGCCAATTTGATAAATGGTGATCAAACGTTAATATACTGTCTGTATTGTGTGTCAATAACTACTTTTACAGCATGAGTTCAGATTCTGTCATTTTGTTGGAGACGGTTAACTTCGCTGCTGAAAAGCACCGCAATCAACGACGTAAAGATGCTGAACAAACACCATATATCACCCACCCAATAGGAGTGGCAAGGATCCTAAGCCATGAAGGTGGGATCACAGACATTGAAGTTTTGCAAGCAGCTTTGCTCCATGACACAGTGGAGGACACTGACACCAGCATAGGAGAGCTACAGATCGTCTTTGGGCAAACGGTGGCGCGGCTGGTCCAGGAAGTGACAGACGACAAAGCACTGTCCAAGGAGGAGACAAAGCGTTGGTCGACAGAGCGTGTTCAGGAGTACTTTGTGTGGGCAGCCCAGGTAGTGAGAGGACTGAGGGGGACCAACCCAGCACTGGAGAGACAACTAGAGGAGCTCTTCAAGCAGAGGGGGGTTGAGCTTTGACACCTCTCTACTTCTGATACAGGGTGGCACAACAGAGCAACTCTTGATGCACACTTTTTGTAAAGAGTAAGACTTTAAGCGAATTGTCTTTGTTAGCTTCTCCATGGAATATACTTTTATATAGTCTTAGCTCTCACAAGGAAAAAGCCCACTTACTTTGGATTTATTTTTATGGATGATTTGATTCTTCATTTGAAGTACAGTGATTTGTATACATTGTGTGTTCCTATAGGAAAACCAACAATGTCACCTTGAGTTCTAGCTGTATTGACTAAAGGAATGCTATGCACTCGTAATGGTGAACATTGTTCAATTATATGGTGATGCAGAACCTGTAACTACTCTGTCATGTCACACTGaactcaaatatatttttgtatagatttttt

Function

NR:

description
guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase MESH1-like isoform X4

GO:

id name namespace
GO:0003824 catalytic activity molecular_function

KEGG:

id description
K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021607810.2 False 1073 mRNA 0.45 4 42524581 42526465
XM_021607811.2 True 966 mRNA 0.44 4 42524583 42526465

Neighbor

gene id symbol gene type direction distance location
LOC110506854 mfap1 coding downstream 8208 42512280 ~ 42516373 (-)
LOC110506162 serinc4 coding downstream 14968 42462581 ~ 42509613 (-)
LOC118944568 LOC106562433 coding downstream 307079 42214901 ~ 42217502 (-)
LOC110506841 cart coding downstream 375715 42147360 ~ 42148871 (-)
LOC118944459 tubgcp4 coding downstream 386577 42118421 ~ 42138004 (-)
LOC110518657 LOC106587629 coding upstream 21884 42548349 ~ 42551080 (-)
LOC110526673 LOC106562627 coding upstream 24747 42551212 ~ 42554509 (-)
LOC118944434 NA coding upstream 37784 42564249 ~ 42565690 (-)
LOC118944394 LOC106587699 coding upstream 77286 42603751 ~ 42608866 (-)
LOC110513924 rasl12 coding upstream 90285 42616181 ~ 42958849 (-)
G2031323 NA non-coding downstream 493 42523870 ~ 42524088 (-)
G2031318 NA non-coding downstream 16234 42508116 ~ 42508347 (-)
G2031309 NA non-coding downstream 36947 42470669 ~ 42487634 (-)
G2031287 NA non-coding downstream 62218 42461976 ~ 42462363 (-)
G2031307 NA non-coding downstream 65790 42458567 ~ 42458791 (-)
G2031342 NA non-coding upstream 30887 42557352 ~ 42557581 (-)
G2031357 NA non-coding upstream 61136 42587601 ~ 42587854 (-)
G2031332 NA non-coding upstream 61873 42588338 ~ 42588647 (-)
G2031518 NA non-coding upstream 64808 42591273 ~ 42591501 (-)
G2031519 NA non-coding upstream 65110 42591575 ~ 42591865 (-)
G2031286 LOC106562727 other downstream 63266 42459257 ~ 42461315 (-)
G2031259 NA other downstream 154672 42368254 ~ 42369909 (-)
G2031225 NA other downstream 177856 42343282 ~ 42346725 (-)
G2031343 NA other upstream 31332 42557797 ~ 42558903 (-)
G2031974 NA other upstream 658171 43184636 ~ 43185724 (-)
LOC110506858 LOC106562715 other upstream 665233 43180007 ~ 43198177 (-)
G2032150 NA other upstream 1042695 43569160 ~ 43570054 (-)

Expression


Co-expression Network