LOC110513925 (LOC106562633)


Basic Information

Item Value
gene id LOC110513925
gene name LOC106562633
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048590.1
NCBI id CM023244.2
chromosome length 51113553
location 42624304 ~ 42627031 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021593567.2
CCTCTGCTATTCTCGTAGCTGTGAAGAGCAATACAAACAGTGGTTACCCTGTCAAGTGCATCTGCTCtgcacagaggagaggaaagagggggattCGGTCTAGCTGCTACTGTACCTCAAGGAAATATCATCATGGATAAAATGTCATGCTAGGACATGAGATATTTTGATCGGACTCAGCACTTCGTCACTCCTGACAAATGCAAATGTGCTGTTTGAACACTTCAGTTGAGGCGATGGAGCCAAGCAGCTGCCCTGGCTCAGGGACCGACAGTGACAAGCCTGCCCTCGGCAAGTCTTTGGACTCAGGGATGGACAGCCTGAAAGTGAGAGTTGACGGGAGCGTTTTTGTGGTGAACAAAGCCCTACTCGAGCAGCACTGTGAGTACTTCCGAGCCCTCTTCCAGTCGGGAATGCGGGAATGCCAACAGGATGAGGTCCATCTGCAAGGGCTGAGCGCCCGGGGATTTGTGTTGGCGCTCCGGGTCCTGGACGGGGATCGCCCCATCCTGGGTGGTGACGAGATTGTGGAAGCCATAGAGTGTGCCACCTTTCTACAGGTGGAGTCTGTGACAAAGCACCTGACCAATATCATCAACTCAGAGAACTGCTTGTTGATGTACCACACGGCTGCGACCTACGGTTTATGGGATCTGTCCCATCAAGCTGCTTTATTCATTAAAGACATGTACTCGGACCTGAAGGAAGATGTTGTGAGCACCTTACCAGAAGACCTAGTGGAGTACGTTGAGTCTCTCATCCCCAGTCGGTACGTCACAGTCTGCAGCCACTCTCCTACCGTCGAGCAGCTCCAGGACTGTCAGAGGACGGTCTGCTACCTGGATGACGAAGATAGAGAATGGAAGGTGCTGAGTCACCTACCCCTAAACACAAGCACCACTATGGCAGGTGTGACCATGCTAGACAACAAGCTGTACATTATAGGAGGCGTCCACGACCTCAGCAAGAAAGTTGTGGACTCTGGCTTCTGCTACGACCCAGAGAGTGACTCCTGGTCCACTATTTCCAGTCCCCAGCAGCCACGCTACAACTTTACGTTAGTGGGCCACGAAGGCTGCCTCTACGCCATCGGTGGGGAGTTCGACCGGAAGTCCATGGCGTTGGTGGAGAAGTACAGTGTCTCCACAGCCACCTGGCGCTTCGCCGCTAATCTCCCCTGCAGAGCCGCCAACGTGGCCTCCACCAAAGCCATGAGCCGCATCTTCATCTGCCTCTGGAAACCCAAGGGCGTTACGGAGATCCACGAGTACGTCCCCGAGAGGGACCAATGGGTCCTGGTCACCACACTAGTCCGTGACCAGAGCTATGGCCACTGCATGGTGGGTCACAGGGACAATTTGTATGTCATGCGCAACGGGCCCTGCGAAGACTTCCTGATGTGCGTGATGGACTGCTACAACCTGACTACGGGTCAGTGGACAGCCTTGCCGGGGCAATACGCAAACAGTAAAGGAGCCCTGTTCACATCGGTAGTAAGAGGGGACTCAGTGTTCACACTCAACCGCATGAGGACCACAGAGTTCGCCGTGGAGGAGCACAGATGGAAAACCAAGAGAGAGACCAAGGGCTTCGGGCGAATCGGCTCCATGTACACATTTCTCATGAGACTGCCCAAGGCCAAGACTGTGGGAAACACTGAGGTGTTGACGGACGGGCTGGAGTTTGGGAATCGGATCGACCACAGACGCAGAGACTCTCTGCTACAATGCTTTGACTGACTTCCTGTGAATAAGTTTAGTCTTTTAATATCTCCTGACAAAccaacaacaggacaatgaactaGAATGCTTTGACTGACTTCTTGTGAATAGGTTTAGTATGTTACTTGGGCCACTTTTAGGAGGCAAACATGGAACGTTGCAGAAAGAGATGTCATGAATATAGCTGACGATTCCTTTTTttacatgtcagagaggcatgtttgttcttcatagcatatttctatctgaatatTACACAACGTTGTGCCGTTCTGAATGTAATCTTGCGGCGTCTGTCTACAAATCAACAAACGAGCTAAAGATGTAAATGTCAGAGACAACAGTAATTTGTAAACATTAAAGTTTGCTTCATTCATGACAAGTTGGAAACTCGGAACCTCTGAGTAAAAATGTATTAACATATTGGTTGATTTGGATACTTTCCAAGTGAGAAATATCAGTTCCCTAGTTTCCACATGTCATGAGTGCAGCATATCTTCCAAGAATAATTAAATAGCATTTAAGAAACTCTAGAGTAATATTGTCTTCTATAGTTCTTGAGAAATGTGTTGCCTCAAGTAGCCTTCTGGGTAATTTGACTCTGTATCCaaatgtagtgtactataaagtGTACTATAATCAAGTGATTCATTACATTGAGTTGACACAGCCCTATCAGAGAGCTCTTTCCATGAAAGCCAAACACATGTTCAGTAATGTACATAAAGACTGAAATCCTTTCCTGTTTTTACAACAAACAAACCATTTATAACCCAGGCTCAGGTCCCCAAGGCATTCGTTGCTAGAGAACAGGGTAAGATAAGGCTGGCAGTTCACACTGTACAATAAAACGTAACGAGGGCATGTTTGCTGCCGTCTCGGGACAGGTATCCCTTGAAGGAGAGATTTGTATTCTCCATGGGATCACCTGTGTAAATACAGGATGATTGGGGAATTCAAATGAATAGATTGTCTTTGGCAGAAGATATATGAAATAATTGTCTTTT

Function

NR:

description
kelch repeat and BTB domain-containing protein 13-like

GO: NA

KEGG:

id description
K21913 KBTBD13; kelch repeat and BTB domain-containing protein 13

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021593567.2 True 2728 mRNA 0.48 1 42624304 42627031
Loading

Neighbor

gene id symbol gene type direction distance location
si:cabz01068815.1 LOC106587700 coding upstream 6731 42609361 ~ 42617573 (+)
LOC118936412 LOC106562630 coding upstream 18905 42591623 ~ 42605399 (+)
LOC110526666 prc1 coding upstream 37506 42576377 ~ 42586798 (+)
LOC110526664 LOC106562628 coding upstream 48126 42565631 ~ 42576178 (+)
hypk hypk coding upstream 112029 42510777 ~ 42512275 (+)
spg21 spg21 coding downstream 47266 42674297 ~ 42681389 (+)
LOC118944566 LOC106587688 coding downstream 103565 42726882 ~ 42748573 (+)
LOC110511523 pcsk6 coding downstream 174839 42801870 ~ 42886938 (+)
LOC110526703 tm6sf1 coding downstream 294856 42921887 ~ 42930481 (+)
LOC110515300 LOC106583399 coding downstream 457601 43084632 ~ 43160907 (+)
G2031358 NA non-coding upstream 33913 42590021 ~ 42590391 (+)
G2031198 NA non-coding upstream 35647 42588359 ~ 42588657 (+)
G2031197 NA non-coding upstream 36457 42586831 ~ 42587847 (+)
G2031194 NA non-coding upstream 67079 42556935 ~ 42557225 (+)
G2031379 NA non-coding downstream 20738 42647769 ~ 42649629 (+)
G2031405 NA non-coding downstream 76810 42703841 ~ 42708770 (+)
G2031417 NA non-coding downstream 97911 42724942 ~ 42737368 (+)
G2031110 NA other upstream 303903 42319310 ~ 42320401 (+)
LOC110526920 scg3 other upstream 901923 41688562 ~ 41722381 (+)
LOC110512697 LOC106562529 other upstream 981320 41600933 ~ 41643474 (+)
G2029990 NA other upstream 1710826 40912935 ~ 40913478 (+)
G2029691 NA other upstream 2082040 40541556 ~ 40542264 (+)
G2031381 LOC106562638 other downstream 24728 42651759 ~ 42654496 (+)
G2031390 NA other downstream 58607 42685638 ~ 42687128 (+)
G2032117 NA other downstream 911959 43538990 ~ 43539362 (+)
LOC110506879 LOC106587845 other downstream 1149556 43774037 ~ 43777549 (+)

Expression

LOC110513925(LOC106562633) Expression in all Baseline Samples

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LOC110513925(LOC106562633) Expression in each Bioproject

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LOC110513925(LOC106562633) Expression in each Sample
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The chart has 1 Y axis displaying Expression. Range: 0 to 20.
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Co-expression Network