LOC118944437


Basic Information

Item Value
gene id LOC118944437
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048590.1
NCBI id CM023244.2
chromosome length 51113553
location 48922297 ~ 48923312 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XR_005039727.1
ATAATGCCTGTAAGAGGAAGGAAACACCGCCAAGAAACCAGGCCATGAACTACAATAACCTTCAGAAACACTTGTTCTAACATTTCCTTATGATCATTTTATGTATCTTCTTTTTAACCAGTAAGTTTATGGTTCAACTAGTGCTTACAAGTAAATGCACCGTGGGCTGCAAGTATTGTATCATAGGTGCTATATACATAAAGATTACTATTATGGTTCATTATTAAAATGAGTGGAATCACTTTTTATGTTCTCCCATCTTCGAGTCATCGTCGGCATTTCTGGGGAGACATTGATTAACATATAGAATCTCATTGTTGTATTTCGTCCAATGGCAGCTTGAATACAATGTTGACACAGTAGGTACATTCCATACACTAAAACACTCCCCCACCCCAACACAATGTTGACACAGTAGGTACATTCCATACACTAAAACACTCCCCCCACCCCAACACAATGTTGACACAGTTGGTACATCCCATACACTAAACCCCCACCACACTGTGTCTGTAATGACACAGTAGGTACATTCCATACACTAAACCCCCACCACACTGTGTCTGTAATGAGACAGTTGGTACATCCCATACACTAAACCCCCACCACACTGTGTCTGTAATGAGACAGTTGGTACATCCCatacactaaaccccccaacacACTGTGTCTGTAATGAGACAGTTGGTACATCCCATACACTAAACCCCCACCACACTGTGTCTGTAATGAGACAGTTGGTACATCCCATACACTAAACCCCCACCACACTGTGTCTGTAATGAGACAGTTGGTACATCCCATACACTAAACCCCCACCACACTGTGTCTGTAATGAGACAGTTGGTACATCCCATACACTAAACCCCCACCACACTGTGTCTGTAATGAGACAGTTGGTACATCCCATACACTAAACCCCCACCACACTGTGTCTGTAATGAGACAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005039727.1 True 949 mRNA 0.43 2 48922297 48923312

Neighbor

gene id symbol gene type direction distance location
LOC110506975 LOC106562560 coding upstream 573420 48335348 ~ 48348877 (+)
LOC110506209 LOC106595677 coding upstream 647021 48253667 ~ 48275276 (+)
LOC110526742 LOC106595196 coding upstream 669116 48240385 ~ 48253181 (+)
LOC110506198 glce coding upstream 695815 48149439 ~ 48226482 (+)
LOC110526998 LOC106562700 coding upstream 812269 48025871 ~ 48110028 (+)
LOC118944429 NA coding downstream 440517 49363829 ~ 49368336 (+)
LOC118944495 LOC106562569 coding downstream 1014759 49938071 ~ 49940598 (+)
LOC118944431 NA coding downstream 1025484 49948796 ~ 49951231 (+)
LOC110517837 LOC106562510 coding downstream 1025846 49949158 ~ 49965507 (+)
LOC110514611 LOC106593737 coding downstream 1046237 49969549 ~ 49986453 (+)
G2036486 mo4l1 non-coding upstream 4586 48916401 ~ 48917711 (+)
G2036471 NA non-coding upstream 37939 48883692 ~ 48884358 (+)
G2036457 NA non-coding upstream 80048 48841862 ~ 48842249 (+)
G2036433 NA non-coding upstream 119519 48802230 ~ 48802778 (+)
G2036420 NA non-coding upstream 138244 48783835 ~ 48784053 (+)
G2036505 NA non-coding downstream 38862 48962174 ~ 48964313 (+)
G2036508 NA non-coding downstream 47862 48971174 ~ 48974904 (+)
G2036510 NA non-coding downstream 51791 48975103 ~ 48977638 (+)
G2036511 NA non-coding downstream 53518 48976830 ~ 48980158 (+)
G2036519 LOC106595921 non-coding downstream 76710 49000022 ~ 49000637 (+)
G2036456 NA other upstream 80584 48840981 ~ 48841713 (+)
G2035721 NA other upstream 691429 48228487 ~ 48230868 (+)
G2035701 NA other upstream 815928 48104908 ~ 48106369 (+)
G2035682 NA other upstream 860857 48059726 ~ 48061440 (+)
G2035141 LOC106562774 other upstream 1487493 47434458 ~ 47434804 (+)
G2036631 NA other downstream 371840 49295152 ~ 49296361 (+)
G2036906 NA other downstream 432883 49356195 ~ 49356544 (+)
G2036925 LOC106563534 other downstream 478088 49401400 ~ 49403012 (+)
G2037387 NA other downstream 985744 49909056 ~ 49910516 (+)
G2037833 NA other downstream 1397610 50320922 ~ 50323439 (+)

Expression


Co-expression Network