Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC110526784 |
| gene name | LOC106562667 |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048590.1 |
| NCBI id | CM023244.2 |
| chromosome length | 51113553 |
| location | 48926465 ~ 48928519 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product, partial |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XM_021607973.2 | True | 2055 | mRNA | 0.45 | 1 | 48926465 | 48928519 |
48,922,400
48,922,800
48,923,200
48,923,600
48,924,000
48,924,400
48,924,800
48,925,200
48,925,600
48,926,000
48,926,400
48,926,800
48,927,200
48,927,600
48,928,000
48,928,400
48,928,800
48,929,200
48,929,600
48,930,000
48,930,400
NC_048590.1
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| mo4l1 | mo4l1 | coding | downstream | 1432 | 48911638 ~ 48925033 (-) |
| LOC118944539 | LOC106587861 | coding | downstream | 32754 | 48811796 ~ 48893711 (-) |
| LOC110487445 | tle3 | coding | downstream | 307573 | 48562877 ~ 48618892 (-) |
| LOC110518410 | LOC106562701 | coding | downstream | 809958 | 48110914 ~ 48116507 (-) |
| LOC110520392 | LOC106562707 | coding | downstream | 933322 | 47896701 ~ 47993143 (-) |
| LOC110527003 | LOC105013624 | coding | upstream | 8523 | 48937042 ~ 49046675 (-) |
| LOC110514539 | LOC106587757 | coding | upstream | 122525 | 49051044 ~ 49060342 (-) |
| LOC110526787 | map2k5 | coding | upstream | 141733 | 49070252 ~ 49192670 (-) |
| smad3 | smad3 | coding | upstream | 408773 | 49317028 ~ 49341509 (-) |
| LOC118936600 | LOC106563534 | coding | upstream | 473638 | 49402157 ~ 49429547 (-) |
| G2036680 | NA | non-coding | downstream | 10463 | 48915563 ~ 48916002 (-) |
| G2036671 | NA | non-coding | downstream | 29906 | 48896223 ~ 48896559 (-) |
| G2036667 | NA | non-coding | downstream | 42178 | 48883922 ~ 48884287 (-) |
| G2036666 | NA | non-coding | downstream | 42645 | 48882369 ~ 48883820 (-) |
| G2036652 | NA | non-coding | downstream | 95075 | 48830563 ~ 48831390 (-) |
| G2036705 | NA | non-coding | upstream | 68042 | 48996561 ~ 48997120 (-) |
| G2036709 | NA | non-coding | upstream | 74169 | 49002688 ~ 49002977 (-) |
| G2036767 | NA | non-coding | upstream | 163014 | 49091533 ~ 49091847 (-) |
| G2036781 | NA | non-coding | upstream | 193764 | 49122283 ~ 49122630 (-) |
| G2036102 | LOC106562708 | other | downstream | 698868 | 48225737 ~ 48227597 (-) |
| trip4 | trip4 | other | downstream | 1347351 | 47504873 ~ 47579187 (-) |
| LOC110506956 | LOC106562712 | other | downstream | 1808305 | 47100651 ~ 47118376 (-) |
| G2034880 | NA | other | downstream | 2095844 | 46830334 ~ 46830621 (-) |
| LOC110513834 | chst1 | other | upstream | 688360 | 49615631 ~ 49620267 (-) |
| G2037622 | LOC106562569 | other | upstream | 1011002 | 49939521 ~ 49941299 (-) |
| G2037650 | NA | other | upstream | 1051282 | 49979801 ~ 49980676 (-) |
| G2037925 | NA | other | upstream | 1373470 | 50301989 ~ 50309277 (-) |
