LOC110514611 (LOC106593737)


Basic Information

Item Value
gene id LOC110514611
gene name LOC106593737
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048590.1
NCBI id CM023244.2
chromosome length 51113553
location 49969549 ~ 49986453 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036963634.1
AGCTTGCCcgtcatcacagagagagagagagtgcagaatGCCAGTGTGACTCCTGGTGAAAAGAAAGGGTTAAATCTCTCTCTTTtagtgtggtgagtgtgtgttcTCAACAGCTGCTTTGCATCTAGAgcccagagaaagagaggatagtgGGATTGATGTGGAGCGTCCTGAACAGGAACACTTTAGATTCCGGACTCCTGTCACTCCTCAGTGACATCATGTGTGTTCTGGGTCCTAGCTCTTTGGTCCTTGTGTGCCAGAGGGTGCAGCCCACTGGGAGGACGACAATGCCCCCTCATCTGCAACCCAGACACCTCCTGCCTCTTCTTCTCCATGTCATTCTACTCTGCCTTCATGCAACTGCCTGGCCCCACGATTCCAGAGGTGTGGTGGATGACAAGTGTCCCAGCTCAGAGTGGAACCACATGTGTAGGGACTGTTGTGAGTACCAGCTGATCCAGTGTAGATGTCCTTCCCAGGGGGCACGGGTGGGCTACTCCGTCCCCTGCTGCCGCAACCAACTGGACCAGTGTGACCCCTGCATCATCCACCCTGGCTGCAGTCTGTTTGAGAACTGTAAAACCTGTCACAATGGGACGTGGGAGGCCAGGGATGATTTCTTCATCCGAGGGAGATTCTGTACGGACTGTCGTCAGGGCTGGGCAGGTGGAGACTGCAAGACATGTGGAGGGGTGATTCGTAGAGCCCAGGGCCACATAATGCTGGAGAGTTACCCCATCAATGCGCACTGTGAGTGGAGGGTGCaggtagagaaaggagagaacgTGGAGCTCAGGTTCTCCATGCTTAGTCTAGAGCCTGACCACAACTGTCACTATGACTACGTGGAGCTGCGAGATGGTGACAGCCTGAGCTCCCCCGTCATTGGCCGGTTTTGTGGGAATGAGCTGCCTCCACCAATCAGAACCTCTGGAAGCACGCTGCACGTCCTGTTTGTCTCAGATGGCTACAACAACTTTGATGGCTTCTTTGCCGCTTTTCAGCAGAGCTCAGCGTGCAGCCCCTCCCCTTGTCAGCACCATGGAACCTGTTTGCTGAACCCAGTACAGTCTTTTCACTGTGCATGTCTGCCAGGCTACACAGGTCAACTGTGTGAGAATGTTGCTaggagtcaggtgtgtgtgttgccagCGAGGCCCGTGAACGGGGAGCTCCTCTCTGTGTACGGCCTGGAGGATGAGCTCCTGGCTGTTCAGTACCTGTGCCACCCACCCTACACACTGACTGGCAGCACCCAGAGGACCTGCCTGCCCAACGCCACCTGGAGTGGCACGGTGCCCATCTGTGGGAAGGTAGATAAAGAGCCCATTCGACCCAGTCAGAGGGGTGCAGACCCAGTCAGAGGGCTCGGGGTGTGTCCTCCTCCAGCCAGGCTGCACCATGGCTACCTCCAGCTGGTCAGGGGCTCTGGAGGAGGTCCTGACACAGTGGACTACTTCTGTAACCCCTCCTACATCCTGAGTGGAGGCTCCCGGAGCACCTGTCTCCCAGATGGCTCGTGGAGTGGCCGGCAACCACTGTGTGTGAGAGCCTGTCGAGAGCCTAAGGTATCTGAGCTGGTGAGACACAAAGTTGTGAAGCCAAAGGCCCCATCCAGGAAAAGTCCAGTCCACATGCTTCACACCTCATCCAGGCATACGGTCTATGACAGTCACCCCCCTGGCATGGACCCACCCTCCTCAGGGAACCTCCCCAGCACCCAAGACCCTGTCCTGAGGGAAATCCCCCGTGGTTTCCACCAGCTGTACACTAGCATAGAGTATGAGTGTGCCTCCTCTGTCTACCAACACTACGGTAGCCCCCGGCGCACCTGTCTGAAGACTGGCAGGTGGAGCGGGCATCATGTCTCCTGCTCGCCAGTGTGTGGTCAACTCCCAGCAGCCTTCAGCCCTCAGAACCTCACTAAGATTGGATGGCCCTGGCATGCAGCCATCTATCTCCGCTCCCACATCATCCGCAGAGCTGGCTCTGGCCTACAGACGGCACCAGAGGAGGCCTCTTCTCCCTGGCAGCTGGCGTGCAGTGGAGCACTAGTCACCCAGCTCAGTGTGCTGGTGGCAGCTCACTGCCTGGTGGTGGCAGGAGTGGGCAAGCCGCAGTGGGTAGATCCAGCCAACATTAAAGTGGTGATGGGAATACACAGCCCGGGCCAGATGAGGACACTGAAACAACTGCAGgtttCCTCTGTCCTGGTCCATCCCAGCTTTGATCCTGTGACACTGGACTCGGACCTGGCCGTTCTGAAGCTACGGGACAAGGCCAAGATCAGTGAGCGTGTGCTGCCCGTGTGTCTCCCCAAAATGCAAGGCGGGGAGGTGACCGCCACACAGGGCTATGCCACAGGCTGGCTCCTTGCATCTGACTCAAGGTCCAGTTCCAAACACAGCCTAGACGCCGAGACAGCCCAGACTGGAGTAGTCGAGCTGGGGGATGTCGTTCAGTGCGAGAGGCAGTTTGCTCAGAGTGGGGCccctgtcaccatcactgacaATATGCTGTGTGCAATGCGCCACCCTCTCAATCCCACCAAGCCTTGTCCCACTGTCAGTGCAGGCATTACAATCATACCATCTCCTGCCTCTAAGCCATCATCGGGTCCTTCGGGGGGACAGGGGGATGATAGTGTTGTCTGGGAGCTTCTGGCATTAGAAAGTTTTGGTTATGAGAAATGGAACTGTGGCCCAGGGCTTTACACAGTCCATACCCGGATAAACAACTTCAAAGACTGGATACAGAAAAACATGAAGTAGATCTCTGATTTGACTCCAGTCTCAGCCACTCTGTCGCCATCATTGACAGCCTGTGTTATTTTTCTAACAACTCACTTACTCACTGTTGCCAGTTCCCTGAAACAGATAACAGGGCTAAGTGCTTGGCAGTGTATTCGGCTGAGCCAATTGGAAACTTCCTAAGACGAGATGTGGGGAGGACAGTCATCCCTGGCACTATTTACTATGATGTATATTTACCTCTAATTACTattatgtacactgaacaaaaatataaacgcaacatgtgaagtgttggttccatgtttcatgagctgaaataaaagatcccagaaaat

Function

NR:

description
PREDICTED: inactive serine protease PAMR1-like, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036963634.1 True 3091 mRNA 0.55 12 49969549 49986453

Neighbor

gene id symbol gene type direction distance location
LOC110517837 LOC106562510 coding upstream 4042 49949158 ~ 49965507 (+)
LOC118944431 NA coding upstream 18318 49948796 ~ 49951231 (+)
LOC118944495 LOC106562569 coding upstream 28951 49938071 ~ 49940598 (+)
LOC118944429 NA coding upstream 601213 49363829 ~ 49368336 (+)
LOC118944437 NA coding upstream 1046237 48922297 ~ 48923312 (+)
LOC118944446 LOC106587903 coding downstream 22341 50008794 ~ 50020545 (+)
LOC110526794 apip coding downstream 54655 50041108 ~ 50048587 (+)
LOC110506980 LOC106593359 coding downstream 123493 50109946 ~ 50151723 (+)
LOC110506984 LOC106562578 coding downstream 357528 50343981 ~ 50349532 (+)
LOC110506216 traf6 coding downstream 374058 50360511 ~ 50373096 (+)
G2037397 NA non-coding upstream 46291 49922820 ~ 49923258 (+)
G2037375 NA non-coding upstream 48571 49885890 ~ 49920978 (+)
G2037374 NA non-coding upstream 84356 49884941 ~ 49885193 (+)
G2037346 NA non-coding upstream 135101 49833948 ~ 49834448 (+)
G2037429 NA non-coding downstream 2531 49988984 ~ 49991022 (+)
G2037433 NA non-coding downstream 36265 50022718 ~ 50107655 (+)
G2037465 NA non-coding downstream 98428 50084881 ~ 50085983 (+)
G2037511 NA non-coding downstream 175038 50161491 ~ 50162384 (+)
G2037387 NA other upstream 59033 49909056 ~ 49910516 (+)
G2036925 LOC106563534 other upstream 566537 49401400 ~ 49403012 (+)
G2036906 NA other upstream 613005 49356195 ~ 49356544 (+)
G2036631 NA other upstream 673188 49295152 ~ 49296361 (+)
G2036456 NA other upstream 1127836 48840981 ~ 48841713 (+)
G2037833 NA other downstream 334469 50320922 ~ 50323439 (+)
G2037834 LOC106562711 other downstream 341867 50328320 ~ 50329070 (+)
LOC110527008 pex16 other downstream 810845 50744617 ~ 50803181 (+)
G2038302 NA other downstream 1014298 51000751 ~ 51003835 (+)

Expression


Co-expression Network