LOC110506995 (LOC106562863)


Basic Information

Item Value
gene id LOC110506995
gene name LOC106562863
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048590.1
NCBI id CM023244.2
chromosome length 51113553
location 50440567 ~ 50446781 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XR_005039904.1
ACCGCTCACAAAATGTCAGTGATCGCATCGGAAGTCAGAGGTaacatccattttttttttcttcaatctgGACATATTGCAGGACGTCATGACGAATGTTCCGACGCCAACTGGTTTGGAGAGCGCGGTAGCACAGAGAGCAACTCTTCCCCGTCGCCATTCAAGCGTTTGTCGGAACTTATTTGGACCCGTCGACCATGATGCGCTGAACCGCGAGTTGAAGGCGAAGCTGAAGGAAATATCTGAACGAGACCAGCGTCGATGGAATTTCCACTTCGAGACAGACGCACCGATTCCCGGGATTTATGAATGGGAAGGAATGTCAGCGGAGTCGATGCCAGCCTTCTACCAGGTGTCGGAAGTTGGAGCACGCAGATTTGTTCCCGAGGAGAAGATCGATGTCTGAGATGACTAGCCCCCAGCACAATACTTCTCTCAATTCCCCTTGAAGAAACGAGGGAACCTTTCGATTAACCACGCTGACAAATGCTACCATCTGCCGCTTCTGCAGTTCATATTTTCTATCTCGGGCCAAAAAAAGATGGAGTAACCCTCCCAAATAAGCAACATGTGtttatgtatttaaaaaaaaaaagaataattcaATTAACTTGTGTTAATTTATTACGTGTCTTGTTTGAAATGGCATCTGTGAAAGACAAACAATTTTGTTGACTTTCTGCTCACTTTATTGCATTAGTGAGCCCTCAAATGATACTTAAGCTTAATTTGCTACATAGGTTATCTGCCTTTTTGCAATTGTTTTCCATTGGACAAAAGATGTAACCCACAAATATGTTGGCTTAGGTTTTTTTGCCAAAGTAACaatgtttttaaattattttatttgatttcaacTAATTTATGTTTTAATTCAATTAAGTTTTCGATTGTTTAAATGGTAGCTGGGGAAACTATTAAAACAATGTAGTTTACA

Function

NR:

description
cyclin-dependent kinase inhibitor 1B-like

GO:

id name namespace
GO:0043086 negative regulation of catalytic activity biological_process
GO:0045859 regulation of protein kinase activity biological_process
GO:0042326 negative regulation of phosphorylation biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005039904.1 True 937 mRNA 0.41 2 50440567 50446781

Neighbor

gene id symbol gene type direction distance location
LOC110506216 traf6 coding upstream 68824 50360511 ~ 50373096 (+)
LOC110506984 LOC106562578 coding upstream 91035 50343981 ~ 50349532 (+)
LOC110506980 LOC106593359 coding upstream 288844 50109946 ~ 50151723 (+)
LOC110526794 apip coding upstream 391980 50041108 ~ 50048587 (+)
LOC118944446 LOC106587903 coding upstream 420022 50008794 ~ 50020545 (+)
LOC110506997 LOC106562470 coding downstream 16844 50463625 ~ 50464821 (+)
LOC118944475 NA coding downstream 97299 50544080 ~ 50599404 (+)
LOC110526797 cars coding downstream 303372 50750153 ~ 50772510 (+)
LOC110527008 pex16 coding downstream 344737 50744617 ~ 50803181 (+)
LOC118936604 LOC106562554 coding downstream 387429 50834210 ~ 50855631 (+)
G2037867 NA non-coding upstream 46683 50393435 ~ 50393884 (+)
G2037855 NA non-coding upstream 60121 50379725 ~ 50380446 (+)
G2037839 NA non-coding upstream 106386 50333870 ~ 50334181 (+)
G2037838 NA non-coding upstream 107336 50332994 ~ 50333231 (+)
G2037989 LOC106562471 non-coding downstream 21435 50468216 ~ 50471240 (+)
G2038047 NA non-coding downstream 137225 50584006 ~ 50588160 (+)
G2038054 NA non-coding downstream 155257 50602038 ~ 50603517 (+)
G2038081 NA non-coding downstream 208506 50655287 ~ 50656652 (+)
G2038098 NA non-coding downstream 250024 50696805 ~ 50698111 (+)
G2037834 LOC106562711 other upstream 111497 50328320 ~ 50329070 (+)
G2037833 NA other upstream 117128 50320922 ~ 50323439 (+)
G2037387 NA other upstream 530051 49909056 ~ 49910516 (+)
G2036925 LOC106563534 other upstream 1037555 49401400 ~ 49403012 (+)
G2038302 NA other downstream 553970 51000751 ~ 51003835 (+)
G2038305 NA other downstream 558851 51005632 ~ 51006168 (+)

Expression


Co-expression Network