LOC110506997 (LOC106562470)


Basic Information

Item Value
gene id LOC110506997
gene name LOC106562470
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048590.1
NCBI id CM023244.2
chromosome length 51113553
location 50463625 ~ 50464821 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036964498.1
TATCCACATTATATCAGTAGTTGCAGTTACGTTGTAGTTAGGTGAAACAGCCCAGTGTGAATCCATTTTGTATTTCTTCAAGACTGGACATATTGCAGGACGTCATGACAAACTTTCAGACGCCAACTGGTTTGGAGAGCGCGGTGGCACAGAGAGCAACTCTTCCCCGTCGCCATTCAAGCGTTTGTCGGAACTTATTTGGACCCGTCGACCATGATGCGCTGAACCGCGAGTTGAAGGCGAAGCTGAAGGAAATATCTGAACGAGACCAGCGTCGATGGAATTTCCACTTCGAGACAGACACACCGATTCCCGGGAGTTACGAATGGGAAGGAATGTCAGCGGACTCCACACCTGCCTTCTACCAGGAGTCGACGGAagttggagacatgagggttcaGGTTGTGACATCAAACACCGACTATAGCGCAGAGGTTGTCACTGATAATGTGCGTGGTTGTTGCCTCAACCAAACCCCTCTATCAGACTGTGAACAGACTGCACTTTGTTCCAACGAAGTTAACCAAGAGAATTGGTCCAATTCCCCCAATACGAAGAAATTGAACTCCAAATCAACACAATGTATTCGGCGTAAGAGGTCGAGGACATCTTATGAACGTGCAGTCAACGTTACTCAAATTACAGATTTTTTCccaaagagaaggagaagatCAACGTCAGAGATGAAGAGCACCCAGCCCAATTCTTCCCTCTCAATTCCTCTTGAACAAACGCCACGCAAAGCTCAAATAATTCGATAAACAACGTGGACAAATCGTACCATAGCCTAATTTTCCACTTAGGCAATCTGCCTCTTTTTgttatgttattattattgtctGTCTTGGACAAAAAAAAAGATGGAGTAACCATCCAAAATATGTTGGCCTATGTTTGTGCCAAAGTAACAATGTATTGTCTTTATTTAAAATattgtttaatttattttatttaagttTCAAATGTGTTTAATTCAACTAAGGTTTATGAGATATTGTTTGTCTGTTGACTTGTATCCGTGAAAAATACTataaaaaaaaacgatttagt

Function

NR:

description
cyclin-dependent kinase inhibitor 1B-like

GO:

id name namespace
GO:0048523 negative regulation of cellular process biological_process
GO:0050790 regulation of catalytic activity biological_process
GO:0042325 regulation of phosphorylation biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036964498.1 True 1050 mRNA 0.42 2 50463625 50464821

Neighbor

gene id symbol gene type direction distance location
LOC110506995 LOC106562863 coding upstream 16844 50440567 ~ 50446781 (+)
LOC110506216 traf6 coding upstream 91882 50360511 ~ 50373096 (+)
LOC110506984 LOC106562578 coding upstream 114093 50343981 ~ 50349532 (+)
LOC110506980 LOC106593359 coding upstream 311902 50109946 ~ 50151723 (+)
LOC110526794 apip coding upstream 415038 50041108 ~ 50048587 (+)
LOC118944475 NA coding downstream 79259 50544080 ~ 50599404 (+)
LOC110526797 cars coding downstream 285332 50750153 ~ 50772510 (+)
LOC110527008 pex16 coding downstream 326697 50744617 ~ 50803181 (+)
LOC118936604 LOC106562554 coding downstream 369389 50834210 ~ 50855631 (+)
LOC110512921 LOC106562604 coding downstream 410087 50874908 ~ 50884663 (+)
G2037867 NA non-coding upstream 69741 50393435 ~ 50393884 (+)
G2037855 NA non-coding upstream 83179 50379725 ~ 50380446 (+)
G2037839 NA non-coding upstream 129444 50333870 ~ 50334181 (+)
G2037838 NA non-coding upstream 130394 50332994 ~ 50333231 (+)
G2037989 LOC106562471 non-coding downstream 3395 50468216 ~ 50471240 (+)
G2038047 NA non-coding downstream 119185 50584006 ~ 50588160 (+)
G2038054 NA non-coding downstream 137217 50602038 ~ 50603517 (+)
G2038081 NA non-coding downstream 190466 50655287 ~ 50656652 (+)
G2038098 NA non-coding downstream 231984 50696805 ~ 50698111 (+)
G2037834 LOC106562711 other upstream 134555 50328320 ~ 50329070 (+)
G2037833 NA other upstream 140186 50320922 ~ 50323439 (+)
G2037387 NA other upstream 553109 49909056 ~ 49910516 (+)
G2036925 LOC106563534 other upstream 1060613 49401400 ~ 49403012 (+)
G2038302 NA other downstream 535930 51000751 ~ 51003835 (+)
G2038305 NA other downstream 540811 51005632 ~ 51006168 (+)

Expression


Co-expression Network