LOC118944475


Basic Information

Item Value
gene id LOC118944475
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048590.1
NCBI id CM023244.2
chromosome length 51113553
location 50544080 ~ 50599404 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XR_005039813.1
agtcccttcctgttcactgattaagaggtgatgaccACTCCACTCTACTGCCATTGTCAACtttctcctgacatgaactgaagccacgtctcatgtgcccggtcatccactggcacattgaGTGTTTCCCCTCCAAGCACTtcaaatcctgtcctgcactgaagtcaagtctctgaacacctcaactcatgctTCATACCCTCATTCAgtcactgctgtgatcccttcccaacactcatgCCTGCTCTGACGTGGACAGGATGATCCTAGGAAACAAGTGTGACATGAAGGACAAAAGACAGGTGTCTAAAGAACGAGGAGAAAAGGTATGGAGGTCAGAGTTCAGGCTTTCAAGTTC

Function

NR:

description
PREDICTED: ras-related protein Rab-8B-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005039813.1 True 358 mRNA 0.48 3 50544080 50599404

Neighbor

gene id symbol gene type direction distance location
LOC110506997 LOC106562470 coding upstream 79259 50463625 ~ 50464821 (+)
LOC110506995 LOC106562863 coding upstream 97299 50440567 ~ 50446781 (+)
LOC110506216 traf6 coding upstream 172337 50360511 ~ 50373096 (+)
LOC110506984 LOC106562578 coding upstream 194548 50343981 ~ 50349532 (+)
LOC110506980 LOC106593359 coding upstream 392357 50109946 ~ 50151723 (+)
LOC110526797 cars coding downstream 150749 50750153 ~ 50772510 (+)
LOC110527008 pex16 coding downstream 192114 50744617 ~ 50803181 (+)
LOC118936604 LOC106562554 coding downstream 234806 50834210 ~ 50855631 (+)
LOC110512921 LOC106562604 coding downstream 275504 50874908 ~ 50884663 (+)
LOC110518959 LOC106587739 coding downstream 301772 50901176 ~ 50996758 (+)
G2037989 LOC106562471 non-coding upstream 72840 50468216 ~ 50471240 (+)
G2037867 NA non-coding upstream 150196 50393435 ~ 50393884 (+)
G2037855 NA non-coding upstream 163634 50379725 ~ 50380446 (+)
G2037839 NA non-coding upstream 209899 50333870 ~ 50334181 (+)
G2038054 NA non-coding downstream 2634 50602038 ~ 50603517 (+)
G2038081 NA non-coding downstream 55883 50655287 ~ 50656652 (+)
G2038098 NA non-coding downstream 97401 50696805 ~ 50698111 (+)
G2038099 NA non-coding downstream 97706 50697110 ~ 50697568 (+)
G2038214 NA non-coding downstream 119436 50718840 ~ 50719070 (+)
G2037834 LOC106562711 other upstream 215010 50328320 ~ 50329070 (+)
G2037833 NA other upstream 220641 50320922 ~ 50323439 (+)
G2037387 NA other upstream 633564 49909056 ~ 49910516 (+)
G2036925 LOC106563534 other upstream 1141068 49401400 ~ 49403012 (+)
G2038302 NA other downstream 401347 51000751 ~ 51003835 (+)
G2038305 NA other downstream 406228 51005632 ~ 51006168 (+)

Expression


Co-expression Network