XLOC_000389 (zgc:174320)


Basic Information

Item Value
gene id XLOC_000389
gene name zgc:174320
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007112.7
NCBI id CM002885.2
chromosome length 59578282
location 32791920 ~ 32793644 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00000662
ATGCTAGAACAGCTCAGTCGAAGAGAGAATGTGATTGTTGGAGGAGATAAGAGGGCTGACTCCCCAGGTCACTCGGCCAAGTATGGGAGTTATACAATGATGGACCTTGCAACTAACACAGTGGTCGACCTAAAGTTAGTCCAGagTAATGAGGTGGGCGGCAGTTACCATATGGAAAAAGAAGGCCTAAAGAGAAGCCTTGACCTGTTGGATGCCCGCGGTGTTCGTCTGGAATGCATCATCACAGACCGACATCCTCAAATGCAGAAATATCTCAGGGATCGAAATGTCACTCAGTTTTACGATGTGTGGCATATCGAGAAAGGAATTTCCAAAAAACTGGACAAGATATGCCAGATAAAGGGGTGTGAGAAGTTGCGTAAATGGTTGCGTAGCATCAAAAACCACATCTACTGGACTGCTGCATCATCCACAACAGGTCCTGAAAGAGTGGCAAAGTGGACCTCTATCTTAAACCATGTACATGAAGACCCCAATTTTCCGGCTTATCTGCATCCGCAACGGATAAGCAGAGACAAGAACAAATGGCTGTCGGCTGCAACGATGCCATTCTACAAGCTGGAGAAAGTTCTCGCTAACAAGAGAATATTGAAGGATGTGGCCAAGCTAAGTCCTCACCACCAGACGTCAACTGTTGAAGCTTTCCACAGCGTCCTACTGCGGTTTGCACCCAAAAATGTGGTATTCCCATTTCTGGGGATGCTATGCAGgtTGTACTTGGCTGCACTGCATTACAATGAAAATGCCGGGCGTCCCCAGGCCACATCAGCAACTGGTAAACCTATTTACAAGCTTGCCTTTCCAAAGGCAAAGAAAGGAGAGTATAGGGTCCGAAAAGTGAAGACGCAGCAAACTTTCgGTTATGTAAAAGAGCTGCTGGACCTCATCTTCAACCAAGTGTTTGTGGACCCATCACCCTATGTTGATGAAGTGTTGGGAATTCACATACCACCTGCTCTATCATCAGCCTGCGATCTACCTGAGATGGAGGAGGCTATCTCCAGCAGGGTGACCCGCTTCAATCAATAG

Function

GO:

id name namespace
GO:0008150 biological_process biological_process
GO:0005575 cellular_component cellular_component
GO:0003674 molecular_function molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-080206-2 No description available

Ensembl:

ensembl_id ENSDARG00000078810

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00000662 True 1050 mRNA 0.47 7 32791920 32793644

Neighbor

gene id symbol gene type direction distance location
XLOC_000388 CU915272.1 coding upstream 85693 32706109 ~ 32706227 (+)
XLOC_000387 nlgn4xa coding upstream 97970 32521469 ~ 32693950 (+)
XLOC_000386 CU462859.1 coding upstream 277816 32513989 ~ 32514104 (+)
XLOC_000385 pudp coding upstream 406255 32341484 ~ 32385665 (+)
XLOC_000384 sts coding upstream 714447 32051581 ~ 32077473 (+)
XLOC_000390 BX322647.1 coding downstream 421597 33215241 ~ 33216718 (+)
XLOC_000391 prkx coding downstream 424267 33217911 ~ 33283689 (+)
XLOC_000392 mxra5a coding downstream 528530 33322174 ~ 33334732 (+)
XLOC_000393 dhrsx coding downstream 590000 33383644 ~ 33487375 (+)
XLOC_000394 NA coding downstream 724158 33517802 ~ 33518823 (+)
XLOC_000383 BX901898.1 non-coding upstream 773805 32017437 ~ 32018115 (+)
XLOC_000381 NA non-coding upstream 779542 32011880 ~ 32012378 (+)
XLOC_000380 NA non-coding upstream 780126 32010262 ~ 32011794 (+)
XLOC_000400 CU915566.1 non-coding downstream 941374 33735018 ~ 33735134 (+)
XLOC_000401 CT573012.1 non-coding downstream 1173513 33967157 ~ 33967273 (+)
XLOC_000403 dre-mir-734 non-coding downstream 1329236 34122880 ~ 34122972 (+)

Expression


Co-expression Network