Gene
RNA
| Item | Value |
|---|---|
| gene id | G1989462 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048590.1 |
| NCBI id | CM023244.2 |
| chromosome length | 51113553 |
| location | 2154090 ~ 2216820 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2275627 | False | 459 | lncRNA | 0.49 | 2 | 2154090 | 2170652 |
| TU2275628 | False | 355 | lncRNA | 0.52 | 4 | 2154090 | 2216820 |
| TU2275626 | True | 389 | lncRNA | 0.52 | 2 | 2215328 | 2216820 |
2,130,000
2,140,000
2,150,000
2,160,000
2,170,000
2,180,000
2,190,000
2,190,000
2,200,000
2,210,000
2,220,000
2,230,000
2,240,000
2,250,000
NC_048590.1
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110518853 | LOC106593614 | coding | upstream | 34542 | 2106537 ~ 2119548 (+) |
| LOC110514234 | LOC106592435 | coding | upstream | 76407 | 2023813 ~ 2095560 (+) |
| LOC110516127 | LOC106562400 | coding | upstream | 217711 | 1931880 ~ 1936379 (+) |
| LOC110518951 | LOC106588123 | coding | upstream | 344970 | 1802957 ~ 1809120 (+) |
| LOC110512298 | LOC106562814 | coding | upstream | 357805 | 1784882 ~ 1796285 (+) |
| LOC118944438 | zdhhc1 | coding | downstream | 83379 | 2300199 ~ 2390150 (+) |
| LOC118936601 | LOC106588035 | coding | downstream | 194641 | 2411461 ~ 2445866 (+) |
| LOC118944541 | NA | coding | downstream | 407930 | 2624750 ~ 2625422 (+) |
| LOC110516197 | LOC106588136 | coding | downstream | 905518 | 3121914 ~ 3321478 (+) |
| LOC110507004 | LOC106588039 | coding | downstream | 1275075 | 3491895 ~ 3496478 (+) |
| G1989446 | NA | non-coding | upstream | 49126 | 2104338 ~ 2104964 (+) |
| G1989441 | NA | non-coding | upstream | 62383 | 2082539 ~ 2091707 (+) |
| G1989439 | NA | non-coding | upstream | 72387 | 2079859 ~ 2081703 (+) |
| G1989417 | NA | non-coding | upstream | 129243 | 2024614 ~ 2024847 (+) |
| G1989414 | NA | non-coding | upstream | 136174 | 2017683 ~ 2017916 (+) |
| G1989472 | NA | non-coding | downstream | 15369 | 2232189 ~ 2233024 (+) |
| G1989885 | NA | non-coding | downstream | 36442 | 2253262 ~ 2253513 (+) |
| G1989897 | NA | non-coding | downstream | 147808 | 2364628 ~ 2366580 (+) |
| G1989898 | NA | non-coding | downstream | 149834 | 2366654 ~ 2367307 (+) |
| G1989900 | NA | non-coding | downstream | 156379 | 2373199 ~ 2374948 (+) |
| G1989393 | NA | other | upstream | 178166 | 1975037 ~ 1975924 (+) |
| G1989338 | NA | other | upstream | 310345 | 1840690 ~ 1843745 (+) |
| G1989250 | NA | other | upstream | 504501 | 1625429 ~ 1649589 (+) |
| G1989958 | NA | other | downstream | 254676 | 2471496 ~ 2483743 (+) |
| G1989960 | NA | other | downstream | 261691 | 2478511 ~ 2480269 (+) |
| G1989959 | NA | other | downstream | 265366 | 2482186 ~ 2483541 (+) |
